Gordonia phage Runhaar
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Detailed Information for Phage Runhaar
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAlysa Runhaar
Year Found2019
Location FoundGrand Rapids, MI United States
Finding InstitutionCalvin College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature19°C
GPS Coordinates42.928016 N, 85.587594 W Map
Discovery NotesOn Calvin University campus, on the island of the Seminary Pond near the bridge, near some small plants
Naming Notesmy last name
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 24, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage31
Genome length (bp)60229
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGCTCT
GC Content51.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDJ
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionCalvin College
Annotation StatusBeing Annotated (Expected completion by 5/1/2020)
Plaque NotesAfter purification, my plaques were very small in size, consistently being about .1 cm circles, my plaques were clear (lytic phage), random distribution. Capsid height: 80nm, Capsid width: 80nm, Tail length: 270-280nm, Tail width:15nm
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload