Mycobacterium phage Shako
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| Detailed Information for Phage Shako | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Madison Chakoumakos |
| Year Found | 2012 |
| Location Found | La Jolla, CA USA |
| Finding Institution | University of California, San Diego |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 32.52 N, 117.14 W Map |
| Discovery Notes | Near Ché Café on UCSD campus in mulch pile, not heavily trafficked area, Dry mulch, sunny, tree nearby (provides no shade), on ground approximately 15 feet from Ché Café |
| Naming Notes | Named after Ché Café (Pronounced Shay) where the phage was found and the first part of the founder's last name: Chako. |
| Sequencing Information | |
| Sequencing Complete? | No |
| Genome length (bp) | Unknown |
| Character of genome ends | Unknown |
| Fasta file available? | No |
| Characterization | |
| Cluster | Unclustered |
| Subcluster | -- |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | Not sequenced |
| Plaque Notes | Bull’s-eye, turbid outside, clear inside, most likely lysogenic outside, then lytic inside, about 4mm (grew 2mm in size over 5 purifications) |
| Morphotype | Siphoviridae |
| Has been Phamerated? | No |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| SEA Lysate Titer | 2.2x10^11 |
| Date of SEA Lysate Titering | Oct 15, 2012 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
