Gordonia phage Sidious
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Detailed Information for Phage Sidious
Discovery Information
Isolation HostGordonia terrae 3612
Found ByJack Burnell and Nate Jordan
Year Found2018
Location FoundOld Town, ME USA
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates44.907962 N, 68.688123 W Map
Naming NotesNamed after Darth Sidious by Nate
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 15, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage758
Genome length (bp)51789
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTGCCAAGGGGA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ7
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Maine, Honors College
Annotation StatusIn GenBank
Plaque NotesPinprick turbid plaques, 1mm diameter
Has been Phamerated?Yes
Gene List

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Sidious_1
(terminase small subunit)

Sidious_2
(terminase large subunit)

Sidious_3
(portal protein)

Sidious_4
(capsid maturation protease)

Sidious_5
(scaffolding protein)

Sidious_6
(major capsid protein)

Sidious_7

Sidious_8
(head-to-tail adaptor)

Sidious_9
(head-to-tail stopper)

Sidious_10

Sidious_11
(tail terminator)

Sidious_12
(major tail protein)

Sidious_13

Sidious_14
(tail assembly chaperone)

Sidious_15
(tail assembly chaperone)

Sidious_16

Sidious_17
(tape measure protein)

Sidious_18
(minor tail protein)

Sidious_19
(minor tail protein)

Sidious_20
(lysin A, L-Ala-D-Glu peptidase domain)

Sidious_21
(lysin A, glycosyl hydrolase domain)

Sidious_22
(holin)

Sidious_23

Sidious_24

Sidious_25

Sidious_26
(lysin B)

Sidious_27
(minor tail protein)

Sidious_28

Sidious_29

Sidious_30
(minor tail protein)

Sidious_31

Sidious_32
(helix-turn-helix DNA binding domain protein)

Sidious_33

Sidious_34

Sidious_35
(RelB-like antitoxin)

Sidious_36

Sidious_37
(tyrosine integrase)

Sidious_38
(helix-turn-helix DNA binding domain protein)

Sidious_39
(peptidase)

Sidious_40
(RexB family abortive infection protein)

Sidious_41
(RexA family abortive infection protein)

Sidious_42

Sidious_43
(immunity repressor)

Sidious_44
(Cro protein)

Sidious_45

Sidious_46

Sidious_47

Sidious_48
(antirepressor)

Sidious_49

Sidious_50
(MerR-like helix-turn-helix DNA binding domain protein)

Sidious_51

Sidious_52

Sidious_53

Sidious_54
(DNA polymerase III subunit)

Sidious_55

Sidious_56
(exonuclease)

Sidious_57
(RecT-like ssDNA binding protein)

Sidious_58

Sidious_59
(DNA polymerase III subunit)

Sidious_60
(ASC-1 transcription coactivator)

Sidious_61

Sidious_62

Sidious_63

Sidious_64
(methyltransferase)

Sidious_65
(methyltransferase)

Sidious_66

Sidious_67

Sidious_68

Sidious_69
(helix-turn-helix DNA binding domain protein)

Sidious_70

Sidious_71
(RusA-like resolvase)

Sidious_72

Sidious_73

Sidious_74

Sidious_75
(helix-turn-helix DNA binding domain protein)

Sidious_76

Sidious_77

Sidious_78

Sidious_79
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK967384
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 85
Pitt Freezer Box Grid# A1
Available Files
EM PictureDownload
GenBank File for PhameratorDownload