| Detailed Information for Phage Sisko |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Max Ungrey |
| Year Found | 2022 |
| Location Found | Tampa, FL United States |
| Finding Institution | University of South Florida |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 32°C |
| GPS Coordinates | 28.061111 N, 82.421389 W Map |
| Discovery Notes | The phage was found in a marshy area near Shriners Children's Hospital. I took soil from a grassy area on the water's edge which emitted a strong musky odor. The humidity was 75% and there was no recent precipitation. |
| Naming Notes | The phage is named after Commander Benjamin Sisko from the TV show Star Trek: Deep Space Nine. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Nov 28, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 798 |
| Genome length (bp) | 62197 |
| Character of genome ends | Circularly Permuted |
| GC Content | 69.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DR |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of South Florida |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques range in size from pinprick size to a diameter of up to 2mm. The plaques are temperate, so they have cloudy edges. |
| Morphotype | Siphoviridae |
| Number of Genes | 84 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OQ938590 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
5.71x10^9 PFU/mL |
| Pitt Freezer Box# |
149 |
| Pitt Freezer Box Grid# |
F9 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
