Microbacterium phage Smarties
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Detailed Information for Phage Smarties
Discovery Information
Isolation HostMicrobacterium paraoxydans NWU1
Found ByVaishnavi Mahalingam
Year Found2019
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.4443 N, 79.9532 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 22, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage121
Genome length (bp)54344
Character of genome endsCircularly Permuted
GC Content68.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesSmall, turbid plaques that were purified to yield slightly larger, clearer plaques.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Smarties_1
(terminase, small subunit)

Smarties_2
(membrane protein)

Smarties_3

Smarties_4

Smarties_5
(terminase, large subunit)

Smarties_6

Smarties_7

Smarties_8

Smarties_9

Smarties_10

Smarties_11

Smarties_12

Smarties_13

Smarties_14

Smarties_15

Smarties_16

Smarties_17

Smarties_18

Smarties_19

Smarties_20

Smarties_21

Smarties_22

Smarties_23

Smarties_24

Smarties_25

Smarties_26
(membrane protein)

Smarties_27

Smarties_28
(portal protein)

Smarties_29

Smarties_30

Smarties_31
(MuF-like minor capsid protein)

Smarties_32

Smarties_33
(capsid maturation protease)

Smarties_34

Smarties_35

Smarties_36

Smarties_37

Smarties_38

Smarties_39
(head-to-tail adaptor)

Smarties_40

Smarties_41

Smarties_42

Smarties_43

Smarties_44
(tape measure protein)

Smarties_45
(minor tail protein)

Smarties_46
(minor tail protein)

Smarties_47
(minor tail protein)

Smarties_48

Smarties_49

Smarties_50
(minor tail protein)

Smarties_51
(lysin A)

Smarties_52
(membrane protein)

Smarties_53
(membrane protein)

Smarties_54
(membrane protein)

Smarties_55
(membrane protein)

Smarties_56
(exonuclease)

Smarties_57
(ssDNA binding protein, ERF family)

Smarties_58

Smarties_59

Smarties_60
(helix-turn-helix DNA binding domain)

Smarties_61

Smarties_62
(HNH endonuclease)

Smarties_63

Smarties_64

Smarties_65

Smarties_66

Smarties_67

Smarties_68

Smarties_69
(helix-turn-helix DNA binding domain)

Smarties_70

Smarties_71

Smarties_72

Smarties_73

Smarties_74
(ssDNA binding protein)

Smarties_75
(membrane protein)

Smarties_76
(helix-turn-helix DNA binding domain)

Smarties_77
(DNA binding protein)

Smarties_78

Smarties_79

Smarties_80
(membrane protein)

Smarties_81
(membrane protein)

Smarties_82

Smarties_83

Smarties_84

Smarties_85

Smarties_86

Smarties_87

Smarties_88

Smarties_89

Smarties_90
(membrane protein)

Smarties_91
(RNA polymerase sigma factor)

Smarties_92
(ParB-like nuclease domain)

Smarties_93
(glycosyltransferase)

Smarties_94
(UDP-glucose dehydrogenase)

Smarties_95
(AAA-ATPase)

Smarties_96

Smarties_97

Smarties_98

Smarties_99

Smarties_100

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586007
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload