Arthrobacter phage SorJuana
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Detailed Information for Phage SorJuana
Discovery Information
Isolation HostArthrobacter sp. ATCC 21022
Found ByTrevor Cross
Year Found2014
Location FoundRoyersford, PA USA
Finding InstitutionCabrini University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.209448 N, 75.559227 W Map
Discovery NotesFound during the winter under a section of frozen water from the Schuylkill River.


Please note that phage lysate was made with glycerol for archiving purposes.
Naming NotesSor Juana was a nun during the 17th century in colonial Mexico who was known for her poetry and intellectual prowess.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 17, 2014
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage348
Genome length (bp)58979
Character of genome endsDirect Terminal Repeat
GC Content53.0%
Sequencing NotesThis phage is Amigo-like, and thus has the same pattern of ends. There's a terminal redundancy where one end is clearly defined (the right end as the genome is canonically oriented) and the other end is less clear. The left end was chosen to match Amigo's left end, and also matches the approximate boundary of the region of double coverage in the SorJuana sequencing data.

With the chosen end, the terminal repeat is 1589 bp, though this is approximate.
Fasta file available?Yes: Download fasta file
Characterization
ClusterAQ
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque Notes5 mm mostly clear plaques after 24 hours at 30⁰C on 4.5 mM CaCl2
MorphotypeSiphoviridae
Number of Genes86
Number of tRNAs7
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU160666
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 2
Pitt Freezer Box Grid# D11
Available Files
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload