Streptomyces phage Thiqqums
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Detailed Information for Phage Thiqqums
Discovery Information
Isolation HostStreptomyces scabiei RL-34
Former namesThicque
Found ByShirin Parsa, Clarisse Lukban
Year Found2019
Location FoundCatonsville, MD United States
Finding InstitutionUniversity of Maryland, Baltimore County
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates39.2585 N, 76.7131 W Map
Discovery NotesCloudy weather
By tall, purple flowers
Collected on Monday, September 9, 2019 at 4:05pm
Naming NotesWe were doing our last titration and wanted to have the name end in "que" like "plaque." Our plaques were looking thick. Hence the name, "Thicque."
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 23, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2281
Genome length (bp)57624
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCCGCCT
GC Content58.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBI
SubclusterBI4
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Maryland, Baltimore County
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Thiqqums_1

Thiqqums_2
(HNH endonuclease)

Thiqqums_3

Thiqqums_4
(endolysin)

Thiqqums_5

Thiqqums_6
(RNA ligase)

Thiqqums_7
(terminase large subunit)

Thiqqums_8

Thiqqums_9
(portal protein)

Thiqqums_10

Thiqqums_11
(major capsid and protease fusion protein)

Thiqqums_12

Thiqqums_13
(tail terminator)

Thiqqums_14
(major tail protein)

Thiqqums_15

Thiqqums_16
(major tail protein)

Thiqqums_17
(glycoside hydrolase)

Thiqqums_18
(tail fiber)

Thiqqums_19

Thiqqums_20

Thiqqums_21
(tape measure protein)

Thiqqums_22
(minor tail protein)

Thiqqums_23
(minor tail protein)

Thiqqums_24

Thiqqums_25
(minor tail protein)

Thiqqums_26

Thiqqums_27
(holin)

Thiqqums_28

Thiqqums_29

Thiqqums_30

Thiqqums_31

Thiqqums_32

Thiqqums_33

Thiqqums_34

Thiqqums_35

Thiqqums_36

Thiqqums_37

Thiqqums_38

Thiqqums_39

Thiqqums_40

Thiqqums_41
(lipoprotein)

Thiqqums_42

Thiqqums_43

Thiqqums_44

Thiqqums_45

Thiqqums_46

Thiqqums_47

Thiqqums_48
(peptidase)

Thiqqums_49

Thiqqums_50

Thiqqums_51

Thiqqums_52

Thiqqums_53

Thiqqums_54

Thiqqums_55
(helicase)

Thiqqums_56

Thiqqums_57

Thiqqums_58

Thiqqums_59
(DNA primase/polymerase)

Thiqqums_60

Thiqqums_61

Thiqqums_62

Thiqqums_63

Thiqqums_64

Thiqqums_65

Thiqqums_66

Thiqqums_67
(helix-turn-helix DNA binding domain protein)

Thiqqums_68

Thiqqums_69

Thiqqums_70

Thiqqums_71

Thiqqums_72

Thiqqums_73
(DprA-like DNA processing chain A)

Thiqqums_74

Thiqqums_75

Thiqqums_76

Thiqqums_77

Thiqqums_78

Thiqqums_79

Thiqqums_80

Thiqqums_81

Thiqqums_82

Thiqqums_83

Thiqqums_84

Thiqqums_85

Thiqqums_86

Thiqqums_87

Thiqqums_88

Thiqqums_89
(DNA helicase)

Thiqqums_90
(HNH endonuclease)

Thiqqums_91
(nuclease)

Thiqqums_92
(RecB-like exonuclease/helicase)

Thiqqums_93
(helix-turn-helix DNA binding domain protein)

Thiqqums_94

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT657340
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 101
Pitt Freezer Box Grid# E2
Available Files
EM PictureDownload
GenBank File for PhameratorDownload