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Streptomyces phage Thiqqums
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Detailed Information for Phage Thiqqums
Discovery Information
Isolation HostStreptomyces scabiei RL-34
Former namesThicque
Found ByShirin Parsa, Clarisse Lukban
Year Found2019
Location FoundCatonsville, MD United States
Finding InstitutionUniversity of Maryland, Baltimore County
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates39.2585 N, 76.7131 W Map
Discovery NotesCloudy weather
By tall, purple flowers
Collected on Monday, September 9, 2019 at 4:05pm
Naming NotesWe were doing our last titration and wanted to have the name end in "que" like "plaque." Our plaques were looking thick. Hence the name, "Thicque."
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 23, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2281
Genome length (bp)57624
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCCGCCT
GC Content58.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBI
SubclusterBI4
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Maryland, Baltimore County
Annotation StatusBeing Annotated (Expected completion by 5/1/2020)
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
EM PictureDownload