Arthrobacter phage Toulouse
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| Detailed Information for Phage Toulouse | |
| Discovery Information | |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Megan Archambault |
| Year Found | 2013 |
| Location Found | Hudson, WI USA |
| Finding Institution | University of Wisconsin-River Falls |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 44.984533 N, 92.7545 W Map |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 28, 2014 |
| Sequencing Facility | Virginia Commonwealth University Nucleic Acids Research Facilities |
| Shotgun Sequencing Method | 454 Pyrosequencing |
| Approximate Shotgun Coverage | 304 |
| Sanger Finishing Reactions | 4 |
| Genome length (bp) | 15319 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CCCGCGCCACC |
| GC Content | 60.3% |
| Sequencing Notes | There is a polymorphism at base 11080 in the sequence. The currently called base is a T, but 48% of the shotgun reads had a C instead, and a Sanger walk in this region showed a nearly evenly mixed C and T peak. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AN |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 25 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewToulouse_1 Toulouse_2 Toulouse_3 Toulouse_4 Toulouse_5 Toulouse_6 Toulouse_7 Toulouse_8 Toulouse_9 Toulouse_10 Toulouse_11 Toulouse_12 Toulouse_13 Toulouse_14 Toulouse_15 Toulouse_16 Toulouse_17 Toulouse_18 Toulouse_19 Toulouse_20 Toulouse_21 Toulouse_22 Toulouse_23 Toulouse_24 Toulouse_25 |
| Submitted Annotation in DNA Master Format | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU160670 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 3.9x10^9 |
| Pitt Freezer Box# | 1 |
| Pitt Freezer Box Grid# | B8 |
| Available Files | |
| Plaque Picture | Download |
| Virtual Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
