Streptomyces phage Tribute
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Detailed Information for Phage Tribute
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Former namesUGoGlenCoco
Found ByMeera Patel
Year Found2016
Location FoundFrisco, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates33.171 N, 96.188 W Map
Discovery Notesthe soil was collected outside of an apartment complex in Frisco, Texas. This soil was considered to be topsoil, and it had rained the day previously.
Naming NotesI named my phage "UGoGlenCoco" because even though this particular phage struggled throughout the semester, it finally came through.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 23, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1414
Genome length (bp)133471
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length10927 bp
GC Content50.0%
Sequencing NotesLeft end was fairly clear based on read buildup, but right end was less so. There was a small buildup of reads at the equivalent spot to Sushi23's right end, so that end was chosen.
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of North Texas
Annotation StatusIn GenBank
Plaque NotesPlaques are lytic, and approximately 1 mm in diameter every time.
Has been Phamerated?Yes
Gene List

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(Lsr2-like DNA bridging protein)

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(HNH endonuclease)

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(ThyX-like thymidylate synthase)

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(nucleotidyl transferase)

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(glycosyltransferase)

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(glycosyltransferase)

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(hydrolase)

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(glycosyltransferase)

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(ribonucleotide reductase)

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(endolysin, LysM-like)

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(portal protein)

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(membrane protein)

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(capsid maturation protease)

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(major capsid protein)

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(major tail protein)

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(tail assembly chaperone)

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(tape measure protein)

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(minor tail protein)

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(minor tail protein)

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(minor tail protein)

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(minor tail protein)

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(HNH endonuclease)

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(metallophosphoesterase)

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Tribute_69

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(DnaB-like dsDNA helicase)

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(DNA primase)

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(ssDNA binding protein)

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(DnaE-like DNA polymerase III (alpha))

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(MazG-like nucleotide pyrophosphohydrolase)

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(RecA-like DNA Recombinase)

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(exonuclease)

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(RuvC-like resolvase)

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(DprA-like DNA processing chain A)

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(thymidylate kinase)

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(terminase)

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(HNH endonuclease)

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(HNH endonuclease)

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(nucleotidyl transferase)

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(FtsK-like DNA translocase)

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Tribute_108

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Tribute_111

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(hydrolase)

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Tribute_117

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(Ro-like RNA binding protein)

Tribute_124
(HNH endonuclease)

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Tribute_128

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Tribute_137

Tribute_141

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Tribute_146
(peptidase)

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Tribute_149

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Tribute_152
(membrane protein, Band-7 -like)

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Tribute_162

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(exonuclease)

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(hydrolase)

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Tribute_184
(acetyltransferase)

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Tribute_187

Tribute_188

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Tribute_191
(RNA ligase)

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(polynucleotide kinase)

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(membrane protein)

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(deoxycytidylate deaminase)

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(rIIA-like protein)

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(rIIB-like protein)

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(phosphoesterase)

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(WhiB family transcription factor)

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(membrane protein)

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(thioredoxin)

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(glycosylase)

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Tribute_253
(Lsr2-like DNA bridging protein)

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Tribute_268
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN369743
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1x10^10 pfu/mL
Pitt Freezer Box# 37
Pitt Freezer Box Grid# A6
Available Files
GenBank File for PhameratorDownload