Mycobacterium phage Typha
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Detailed Information for Phage Typha
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMichael Herrera
Year Found2015
Location FoundMiami, FL USA
Finding InstitutionFlorida International University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates25.42 N, 80.17 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 14, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage797
Genome length (bp)75687
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceTGCCGCCCGGTA
GC Content66.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterY
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionMarywood University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Typha_1
(ParB-like nuclease domain protein)

Typha_2

Typha_3
(queuine tRNA-ribosyltransferase)

Typha_4

Typha_5
(QueD-like queosine biosynthesis protein)

Typha_6
(QueE-like queosine biosynthesis protein)

Typha_7
(GTP cyclohydrolase I)

Typha_8
(RNaseE)

Typha_9
(terminase)

Typha_10

Typha_11
(portal protein)

Typha_12
(capsid maturation protease)

Typha_13
(major capsid protein)

Typha_14

Typha_15
(head-to-tail adaptor)

Typha_16
(head-to-tail stopper)

Typha_17

Typha_18
(tail terminator)

Typha_19
(major tail protein)

Typha_20
(tail assembly chaperone)

Typha_21
(tail assembly chaperone)

Typha_22
(tape measure protein)

Typha_23
(minor tail protein)

Typha_24
(minor tail protein)

Typha_25

Typha_26

Typha_27
(minor tail protein)

Typha_28
(minor tail protein)

Typha_29

Typha_30

Typha_31
(lysin A)

Typha_32
(lysin B)

Typha_33
(holin)

Typha_34

Typha_35

Typha_36

Typha_37

Typha_38

Typha_39

Typha_42
(BrnT-like toxin)

Typha_43

Typha_44

Typha_45

Typha_46

Typha_47

Typha_48
(helix-turn-helix DNA binding domain protein)

Typha_49

Typha_50

Typha_51

Typha_52
(integrase)

Typha_53
(immunity repressor)

Typha_54

Typha_55

Typha_56
(DnaQ-like exonuclease)

Typha_57

Typha_58

Typha_59

Typha_60

Typha_61

Typha_62

Typha_63

Typha_64
(HNH endonuclease)

Typha_65
(RecE-like exonuclease)

Typha_66
(RecT-like ssDNA binding protein)

Typha_67

Typha_68

Typha_69

Typha_70
(ParB-like nuclease domain protein)

Typha_71

Typha_72
(helix-turn-helix DNA-binding domain protein)

Typha_73

Typha_74

Typha_75

Typha_76

Typha_77
(HNH endonuclease)

Typha_78

Typha_79

Typha_80

Typha_81

Typha_82

Typha_83
(RuvC-like resolvase)

Typha_84

Typha_85

Typha_86

Typha_87

Typha_88

Typha_89

Typha_90

Typha_91

Typha_92

Typha_93

Typha_94

Typha_95

Typha_96

Typha_97

Typha_98

Typha_99

Typha_100

Typha_101

Typha_102

Typha_103

Typha_104

Typha_105

Typha_106

Typha_107

Typha_108

Typha_109

Typha_110

Typha_111

Typha_112

Typha_113

Typha_114

Typha_115

Typha_116

Typha_117

Typha_118

Typha_119

Typha_120

Typha_121

Typha_122

Typha_123

Typha_124

Typha_125
(AAA-ATPase)

Typha_126

Typha_127

Typha_128

Typha_129
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK494099
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 26
Pitt Freezer Box Grid# F6
Available Files
GenBank File for PhameratorDownload