Gordonia phage Whiteclaw
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Detailed Information for Phage Whiteclaw
Discovery Information
Isolation HostGordonia terrae 3612
Found ByGemma Gile and Samantha Troost
Year Found2019
Location FoundNewburgh, NY United States
Finding InstitutionMount Saint Mary College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates41.61 N, 74.16 W Map
Discovery NotesIt was a sunny day and the temperature was warm. The sample was fairly dry.
Naming NotesWe decided to go with thew most commonly known drink for white girls because we are both fans of the drink.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1642
Genome length (bp)46221
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTACCAGGGGGA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ2
Cluster Life CycleTemperate
Lysogeny NotesPatch assay and phage release assay indicate this is a lysogen
Other Cluster Members
Annotating InstitutionMount Saint Mary College
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

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Whiteclaw_1
(terminase small subunit)

Whiteclaw_2
(terminase large subunit)

Whiteclaw_3
(portal protein)

Whiteclaw_4
(capsid maturation protease)

Whiteclaw_5
(scaffolding protein)

Whiteclaw_6
(major capsid protein)

Whiteclaw_7

Whiteclaw_8
(head-to-tail adaptor)

Whiteclaw_9
(head-to-tail stopper)

Whiteclaw_10

Whiteclaw_11
(tail terminator)

Whiteclaw_12
(major tail protein)

Whiteclaw_13
(tail assembly chaperone)

Whiteclaw_14
(tail assembly chaperone)

Whiteclaw_15
(tape measure protein)

Whiteclaw_16
(minor tail protein)

Whiteclaw_17
(minor tail protein)

Whiteclaw_18
(lysin A)

Whiteclaw_19

Whiteclaw_20
(holin)

Whiteclaw_21

Whiteclaw_22

Whiteclaw_23

Whiteclaw_24
(lysin B)

Whiteclaw_25
(minor tail protein)

Whiteclaw_26

Whiteclaw_27

Whiteclaw_28
(minor tail protein)

Whiteclaw_29

Whiteclaw_30
(excise)

Whiteclaw_31

Whiteclaw_32

Whiteclaw_33

Whiteclaw_34

Whiteclaw_35

Whiteclaw_36

Whiteclaw_37
(tyrosine integrase)

Whiteclaw_38

Whiteclaw_39

Whiteclaw_40
(helix-turn-helix DNA binding domain protein)

Whiteclaw_41
(peptidase)

Whiteclaw_42

Whiteclaw_43

Whiteclaw_44
(immunity repressor)

Whiteclaw_45
(helix-turn-helix DNA binding domain protein)

Whiteclaw_46

Whiteclaw_47
(DNA polymerase III sliding clamp)

Whiteclaw_48

Whiteclaw_49

Whiteclaw_50

Whiteclaw_51

Whiteclaw_52

Whiteclaw_53
(exonuclease)

Whiteclaw_54
(RecT-like ssDNA binding protein)

Whiteclaw_55

Whiteclaw_56

Whiteclaw_57

Whiteclaw_58

Whiteclaw_59
(ASC-1 transcription coactivator)

Whiteclaw_60

Whiteclaw_61
(DNA methylase)

Whiteclaw_62

Whiteclaw_63

Whiteclaw_64

Whiteclaw_65

Whiteclaw_66

Whiteclaw_67

Whiteclaw_68
(RusA-like resolvase)

Whiteclaw_69

Whiteclaw_70
(helix-turn-helix DNA binding domain protein)

Whiteclaw_71

Whiteclaw_72

Whiteclaw_73

Whiteclaw_74

Whiteclaw_75

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW507130
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1 x 10^10
Pitt Freezer Box# 109
Pitt Freezer Box Grid# A4
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload