Gordonia phage Wooper
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Detailed Information for Phage Wooper
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByTyler Di Bari
Year Found2020
Location FoundLas Vegas, NV United States of America
Finding InstitutionCollege of Southern Nevada
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature37°C
GPS Coordinates36.1 N, 115.11 W Map
Discovery NotesFound at a park pond. The pond is visited by many different bird species. The soil was collected at the edge of the pond so it was submerged in water.
Naming NotesNamed after a water/ground pokemon
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 25, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage292
Genome length (bp)61155
Character of genome endsCircularly Permuted
GC Content68.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDR
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionSUNY Old Westbury
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Wooper_1
(ParB-like nuclease domain protein)

Wooper_2
(Tet-like J-binding protein)

Wooper_3
(aGPT-Pplase2 domain protein)

Wooper_4
(5-hmU DNA kinase)

Wooper_5

Wooper_6
(terminase)

Wooper_7

Wooper_8
(RuvC-like resolvase)

Wooper_9

Wooper_10
(portal protein)

Wooper_11
(capsid maturation protease)

Wooper_12

Wooper_13
(major capsid hexamer protein)

Wooper_14
(major capsid pentamer protein)

Wooper_15

Wooper_16
(holin)

Wooper_17

Wooper_18

Wooper_19

Wooper_20
(major tail protein)

Wooper_21
(head-to-tail adaptor)

Wooper_22

Wooper_23

Wooper_24
(tail assembly chaperone)

Wooper_25
(tail assembly chaperone)

Wooper_26
(tape measure protein)

Wooper_27
(minor tail protein)

Wooper_28
(minor tail protein)

Wooper_29
(minor tail protein)

Wooper_30

Wooper_31

Wooper_32

Wooper_33

Wooper_34

Wooper_35

Wooper_36

Wooper_37
(hydrolase)

Wooper_38

Wooper_39

Wooper_40
(helix-turn-helix DNA binding domain)

Wooper_41
(helix-turn-helix DNA binding domain)

Wooper_42

Wooper_43
(lysin A, L-Ala-D-Glu peptidase domain)

Wooper_44
(lysin A, glycosyl hydrolase domain)

Wooper_45
(lysin B)

Wooper_46

Wooper_47
(RecB-like exonuclease/nuclease)

Wooper_48

Wooper_49
(helicase)

Wooper_50

Wooper_51

Wooper_52
(RepA-like helicase)

Wooper_53

Wooper_54
(DNA polymerase I)

Wooper_55

Wooper_56

Wooper_57

Wooper_58

Wooper_59

Wooper_60
(polynucleotide kinase)

Wooper_61

Wooper_62

Wooper_63
(ribbon-helix-helix DNA binding domain protein)

Wooper_64

Wooper_65

Wooper_66
(DNA binding protein)

Wooper_67

Wooper_68

Wooper_69

Wooper_70

Wooper_71

Wooper_72

Wooper_73

Wooper_74
(helix-turn-helix DNA binding domain)

Wooper_75

Wooper_76

Wooper_77

Wooper_78

Wooper_79
(HNH endonuclease)

Wooper_80

Wooper_81

Wooper_82

Wooper_83

Wooper_84

Wooper_85

Wooper_86

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP910132
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 117
Pitt Freezer Box Grid# E3
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload