Gordonia phage Bachita
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Detailed Information for Phage Bachita
Discovery Information
Isolation HostGordonia terrae 3612
Found ByCarlos Guerrero
Year Found2012
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.444800 N, 79.952700 W Map
Discovery NotesIsolated from mud containing decomposing leaves
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 7, 2014
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage178
Sanger Finishing Reactions7
Genome length (bp)93843
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCGACGCTC
End Determination NotesRead buildups and Sanger reads.
GC Content61.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCQ
SubclusterCQ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes182
Number of tRNAs8
Has been Phamerated?Yes
Gene List

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Bachita_1

Bachita_2

Bachita_3

Bachita_4

Bachita_5

Bachita_6

Bachita_7

Bachita_8

Bachita_9

Bachita_10

Bachita_11

Bachita_12

Bachita_13

Bachita_14

Bachita_15
(HNH endonuclease)

Bachita_16

Bachita_17

Bachita_18

Bachita_19

Bachita_20

Bachita_28
(HNH endonuclease)

Bachita_29

Bachita_31

Bachita_32
(terminase)

Bachita_33
(portal protein)

Bachita_34
(MuF-like minor capsid protein)

Bachita_35

Bachita_36
(capsid decoration protein)

Bachita_37
(major capsid protein)

Bachita_38

Bachita_39

Bachita_40

Bachita_41

Bachita_42
(tail terminator)

Bachita_43
(holliday junction resolvase)

Bachita_44

Bachita_45

Bachita_46
(tail assembly chaperone)

Bachita_47
(tail assembly chaperone)

Bachita_48
(tape measure protein)

Bachita_49
(minor tail protein)

Bachita_50
(minor tail protein)

Bachita_51
(lysin A, protease C39 domain)

Bachita_52
(lysin A, L-Ala-D-Glu peptidase domain)

Bachita_53
(holin)

Bachita_54

Bachita_55

Bachita_56

Bachita_57
(minor tail protein)

Bachita_58
(minor tail protein)

Bachita_59

Bachita_60

Bachita_61

Bachita_62
(Lsr2-like DNA bridging protein)

Bachita_63

Bachita_64

Bachita_65

Bachita_66
(exonuclease VII)

Bachita_67

Bachita_68

Bachita_69

Bachita_70

Bachita_71
(MRE11 double-strand break repair endo/exonuclease)

Bachita_72

Bachita_73

Bachita_74
(RtcB-like RNA ligase)

Bachita_75

Bachita_76

Bachita_77

Bachita_78

Bachita_79

Bachita_80

Bachita_81

Bachita_82

Bachita_83

Bachita_84

Bachita_85
(tyrosine integrase)

Bachita_86

Bachita_87
(immunity repressor)

Bachita_88

Bachita_89
(RecE-like exonuclease)

Bachita_90

Bachita_91

Bachita_92

Bachita_93
(RecT-like DNA pairing protein)

Bachita_94
(ThyX-like thymidylate synthase)

Bachita_95

Bachita_96

Bachita_97

Bachita_98

Bachita_99

Bachita_100
(helix-turn-helix DNA binding protein)

Bachita_101

Bachita_102

Bachita_103

Bachita_104
(helix-turn-helix DNA binding protein)

Bachita_105

Bachita_106

Bachita_107

Bachita_108
(MazG-like nucleotide pyrophosphate)

Bachita_109

Bachita_110

Bachita_111

Bachita_112

Bachita_113

Bachita_114

Bachita_115

Bachita_116

Bachita_117

Bachita_118

Bachita_119
(CobT-like cobalamin biosynthesis protein)

Bachita_120

Bachita_121

Bachita_122

Bachita_123

Bachita_124

Bachita_125
(DNA primsae/helicase)

Bachita_126

Bachita_127

Bachita_128
(thioredoxin)

Bachita_129
(ssDNA binding protein)

Bachita_130

Bachita_131

Bachita_132

Bachita_133

Bachita_134

Bachita_135

Bachita_136

Bachita_137
(holliday junction resolvase)

Bachita_138

Bachita_139

Bachita_140
(nucleotidyltransferase)

Bachita_141

Bachita_142

Bachita_143

Bachita_144

Bachita_145

Bachita_146

Bachita_147
(phosphatase)

Bachita_148

Bachita_149

Bachita_150

Bachita_151
(serine hydrolase)

Bachita_152

Bachita_153

Bachita_154

Bachita_155

Bachita_156

Bachita_157

Bachita_158

Bachita_159

Bachita_160

Bachita_161

Bachita_162

Bachita_163

Bachita_164

Bachita_165

Bachita_166

Bachita_167

Bachita_168

Bachita_169

Bachita_170

Bachita_171

Bachita_172

Bachita_173

Bachita_174

Bachita_175

Bachita_176

Bachita_177

Bachita_178

Bachita_179

Bachita_180

Bachita_181

Bachita_182

Bachita_183

Bachita_184

Bachita_185

Bachita_186

Bachita_187

Bachita_188

Bachita_189

Bachita_190

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU998247
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Available Files
EM PictureDownload
Final DNAMaster FileDownload