Gordonia phage Charianelly
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Detailed Information for Phage Charianelly
Discovery Information
Isolation HostGordonia terrae 3612
Found ByUTA, Karla Frank, Rianka Guha, Chintha Kathiresan,
Year Found2022
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.4453 N, 79.9617 W Map
Discovery NotesDiscovered and prepared by UTA for class demonstration in BIOSC 0058 University of Pittsburgh course. This phage was adopted with only GPS coordinates provided.
Naming NotesCombination of team member names
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 4, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage327
Genome length (bp)73732
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length184 bp
GC Content59.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS3
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusQC Complete
Has been Phamerated?Yes
Gene List

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Charianelly_1

Charianelly_2
(DNA helicase)

Charianelly_3

Charianelly_4

Charianelly_5
(DNA primase)

Charianelly_6

Charianelly_7
(terminase)

Charianelly_8
(portal protein)

Charianelly_9

Charianelly_10

Charianelly_11
(capsid maturation protease)

Charianelly_12
(capsid decoration protein)

Charianelly_13
(major capsid protein)

Charianelly_14

Charianelly_15

Charianelly_16
(head-to-tail adaptor)

Charianelly_17

Charianelly_18

Charianelly_19

Charianelly_20
(major tail protein)

Charianelly_22
(tail assembly chaperone)

Charianelly_23
(tail assembly chaperone)

Charianelly_24
(tape measure protein)

Charianelly_25
(minor tail protein)

Charianelly_26
(minor tail protein)

Charianelly_27
(minor tail protein)

Charianelly_28

Charianelly_29

Charianelly_30

Charianelly_31

Charianelly_32

Charianelly_33
(holin)

Charianelly_34

Charianelly_35
(endolysin, N-acetylmuramoyl-L-alanine amidase domain)

Charianelly_36
(endolysin, protease M23 domain)

Charianelly_37

Charianelly_38

Charianelly_39

Charianelly_40

Charianelly_41
(Cas4 exonuclease)

Charianelly_42
(WhiB family transcription factor)

Charianelly_43

Charianelly_44

Charianelly_45

Charianelly_46
(DNA methyltransferase)

Charianelly_47

Charianelly_48

Charianelly_49
(MazG-like nucleotide pyrophosphohydrolase)

Charianelly_50
(RusA-like resolvase)

Charianelly_51
(nucleoside deoxyribosyltransferase)

Charianelly_52
(DNA polymerase III sliding clamp (Beta))

Charianelly_53

Charianelly_54
(DnaQ-like (DNA polymerase III subunit))

Charianelly_55
(helix-turn-helix DNA binding protein)

Charianelly_56

Charianelly_57
(DNA helicase)

Charianelly_58

Charianelly_59

Charianelly_60

Charianelly_61
(helix-turn-helix DNA binding domain protein)

Charianelly_62

Charianelly_63

Charianelly_64

Charianelly_65

Charianelly_66

Charianelly_67

Charianelly_68

Charianelly_69

Charianelly_70

Charianelly_71

Charianelly_72

Charianelly_73

Charianelly_74

Charianelly_75

Charianelly_76

Charianelly_77

Charianelly_78

Charianelly_79

Charianelly_80

Charianelly_81
(CobT-like cobalamin biosynthesis protein)

Charianelly_82
(AAA-ATPase)

Charianelly_83

Charianelly_84

Charianelly_85

Charianelly_86

Charianelly_87

Charianelly_88

Charianelly_89

Charianelly_90

Charianelly_91

Charianelly_92

Charianelly_93

Charianelly_94

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 159
Pitt Freezer Box Grid# E6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload