Detailed Information for Phage Xenia2 | |
Discovery Information | |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Carol Agaiby |
Year Found | 2023 |
Location Found | Tampa, FL United States |
Finding Institution | University of South Florida |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 28.066944 N, 82.414722 W Map |
Discovery Notes | Found in a grassy area near a tree Soil was wet, dark and rich Soil was not sandy |
Naming Notes | I chose the name Xenia because it is a Greek word meaning "hospitality" and signifies a long friendship. This was my first research project and my phage and I have been in it together all throughout my journey which is why I thought that friendship would be a perfect way to describe my phage. We will be friends forever! |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 6, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 921 |
Genome length (bp) | 68135 |
Character of genome ends | Circularly Permuted |
GC Content | 57.9% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | DV |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | University of South Florida |
Annotation Status | In GenBank |
Plaque Notes | My phage creates both medium and large-sized plaques with jagged edges |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
Click to ViewXenia2_Draft_1 Xenia2_Draft_2 Xenia2_Draft_3 Xenia2_Draft_4 Xenia2_Draft_5 Xenia2_Draft_6 Xenia2_Draft_7 Xenia2_Draft_8 Xenia2_Draft_9 Xenia2_Draft_10 Xenia2_Draft_11 Xenia2_Draft_12 Xenia2_Draft_13 Xenia2_Draft_14 Xenia2_Draft_15 Xenia2_Draft_16 Xenia2_Draft_17 Xenia2_Draft_18 Xenia2_Draft_19 Xenia2_Draft_20 Xenia2_Draft_21 Xenia2_Draft_22 Xenia2_Draft_23 Xenia2_Draft_24 Xenia2_Draft_25 Xenia2_Draft_26 Xenia2_Draft_27 Xenia2_Draft_28 Xenia2_Draft_29 Xenia2_Draft_30 Xenia2_Draft_31 Xenia2_Draft_32 Xenia2_Draft_33 Xenia2_Draft_34 Xenia2_Draft_35 Xenia2_Draft_36 Xenia2_Draft_37 Xenia2_Draft_38 Xenia2_Draft_39 Xenia2_Draft_40 Xenia2_Draft_41 Xenia2_Draft_42 Xenia2_Draft_43 Xenia2_Draft_44 Xenia2_Draft_45 Xenia2_Draft_46 Xenia2_Draft_47 Xenia2_Draft_48 Xenia2_Draft_49 Xenia2_Draft_50 Xenia2_Draft_51 Xenia2_Draft_52 Xenia2_Draft_53 Xenia2_Draft_54 Xenia2_Draft_55 Xenia2_Draft_56 Xenia2_Draft_57 Xenia2_Draft_58 Xenia2_Draft_59 Xenia2_Draft_60 Xenia2_Draft_61 Xenia2_Draft_62 Xenia2_Draft_63 Xenia2_Draft_64 Xenia2_Draft_65 Xenia2_Draft_66 Xenia2_Draft_67 Xenia2_Draft_68 Xenia2_Draft_69 Xenia2_Draft_70 Xenia2_Draft_71 Xenia2_Draft_72 Xenia2_Draft_73 Xenia2_Draft_74 Xenia2_Draft_75 Xenia2_Draft_76 Xenia2_Draft_77 Xenia2_Draft_78 Xenia2_Draft_79 Xenia2_Draft_80 Xenia2_Draft_81 Xenia2_Draft_82 Xenia2_Draft_83 Xenia2_Draft_84 Xenia2_Draft_85 Xenia2_Draft_86 Xenia2_Draft_87 Xenia2_Draft_88 Xenia2_Draft_89 Xenia2_Draft_90 Xenia2_Draft_91 Xenia2_Draft_92 Xenia2_Draft_93 Xenia2_Draft_94 Xenia2_Draft_95 Xenia2_Draft_96 |
Submitted Minimal DNA Master File | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | PP725409 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 172 |
Pitt Freezer Box Grid# | H2 |
Available Files | |
GenBank File for Phamerator | Download |