Mycobacterium phage SoupAstar
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| Detailed Information for Phage SoupAstar | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Team ScarPhage |
| Year Found | 2013 |
| Location Found | Los Angeles, CA USA |
| Finding Institution | University of California, Los Angeles |
| Program | Unavailable |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 34.07 N, 118.4 W Map |
| Discovery Notes | Phage isolation performed in Fall 2013 by Team Scarphage: Jeff Doan, Kayvan Sasaninia, Christine Tran, and Vivian Yuen. DNA preparation performed by Krisanavane Reddi. Assembly performed by William Villella (UCLA). Sequencing notes: Mix of 2 phages - cluster A2 and A6 - could not be separated bioinformatically; no morphology difference, would have to re-purify. --- Soil sample collected along Gayley Ave and Strathmore Pl near the De Neve cross walk light at UCLA on October 2, 2013; sample from moist soil located under a tree. |
| Sequencing Information | |
| Sequencing Complete? | No |
| Sequencing Facility | The UCLA Genotyping and Sequencing Core |
| Shotgun Sequencing Method | 454 Pyrosequencing |
| Genome length (bp) | Unknown |
| Character of genome ends | Unknown |
| Fasta file available? | No |
| Characterization | |
| Cluster | A |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | Not sequenced |
| Plaque Notes | Plaque morphology: a. Turbid, halo b. Average diameter:7 mm c. Diameter range: 6 mm – 11 mm |
| Morphotype | Siphoviridae |
| Has been Phamerated? | No |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 23 |
| Pitt Freezer Box Grid# | C9 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |