Arthrobacter phage AnnabelLee
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Detailed Information for Phage AnnabelLee
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found BySidney Rivas, Saroj Chirravuri and Herbert Wildey
Year Found2024
Location FoundBaltimore, MD United States
Finding InstitutionHoward Hughes Medical Institute
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates38.927351 N, 77.040505 W Map
Discovery NotesThe same phage was isolated by several independent isolations, indicating its prevalence in local soil samples.
The finders include Sidney Rivas, Saroj Chirravuri and Herbert Wildey from GateWay community College at the 2024 SEA-PHAGES Discovery Workshop.
Naming NotesAnnabel Lee was chosen because it was a Poem by Edgar Allan Poe who was born in Baltimore, MD, where the phage was isolated
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 22, 2024
Sequencing FacilityHHMI SEAquencing Core
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage10692
Genome length (bp)39635
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTACGGCAT
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFR
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUniversity of Ibadan
Annotation StatusIn GenBank
Plaque NotesMedium size clear plaques.
Number of Genes69
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

AnnabelLee_1

AnnabelLee_2
(nuclease)

AnnabelLee_3
(NrdH-like glutaredoxin)

AnnabelLee_4
(terminase)

AnnabelLee_5
(portal protein)

AnnabelLee_6

AnnabelLee_7
(scaffolding protein)

AnnabelLee_8
(Major capsid protein)

AnnabelLee_9

AnnabelLee_10
(head-to-tail adaptor)

AnnabelLee_11
(head-to-tail stopper)

AnnabelLee_12

AnnabelLee_13
(Tail terminator)

AnnabelLee_14
(major tail protein)

AnnabelLee_15
(tail assembly chaperone)

AnnabelLee_16
(tail assembly chaperone)

AnnabelLee_17
(Tape Measure Protein)

AnnabelLee_18
(minor tail protein)

AnnabelLee_19
(minor tail protein)

AnnabelLee_20

AnnabelLee_21
(endolysin)

AnnabelLee_22
(holin)

AnnabelLee_23
(minor tail protein)

AnnabelLee_24
(minor tail protein)

AnnabelLee_25

AnnabelLee_26

AnnabelLee_27

AnnabelLee_28

AnnabelLee_29

AnnabelLee_30

AnnabelLee_31

AnnabelLee_32

AnnabelLee_33
(DNA primase/polymerase)

AnnabelLee_34
(dUTPase)

AnnabelLee_35

AnnabelLee_36
(ASCE ATPase)

AnnabelLee_37
(Cas4 family exonuclease)

AnnabelLee_38
(DNA helicase)

AnnabelLee_39
(RuvC-like resolvase)

AnnabelLee_40
(DNA polymerase I)

AnnabelLee_41
(Dihydrofolate reductase)

AnnabelLee_42

AnnabelLee_43
(Deoxycytidylate deaminase)

AnnabelLee_44

AnnabelLee_45

AnnabelLee_46

AnnabelLee_47

AnnabelLee_48

AnnabelLee_49

AnnabelLee_50

AnnabelLee_51

AnnabelLee_52

AnnabelLee_53

AnnabelLee_54

AnnabelLee_55

AnnabelLee_56

AnnabelLee_57

AnnabelLee_58

AnnabelLee_59

AnnabelLee_60

AnnabelLee_61

AnnabelLee_62

AnnabelLee_63
(helix-turn-helix DNA binding domain)

AnnabelLee_64

AnnabelLee_65

AnnabelLee_66

AnnabelLee_67

AnnabelLee_68

AnnabelLee_69
(thymidylate synthase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV940993
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload