Detailed Information for Phage AnnabelLee |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Sidney Rivas, Saroj Chirravuri and Herbert Wildey |
Year Found | 2024 |
Location Found | Baltimore, MD United States |
Finding Institution | Howard Hughes Medical Institute |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 38.927351 N, 77.040505 W Map |
Discovery Notes | The same phage was isolated by several independent isolations, indicating its prevalence in local soil samples. The finders include Sidney Rivas, Saroj Chirravuri and Herbert Wildey from GateWay community College at the 2024 SEA-PHAGES Discovery Workshop. |
Naming Notes | Annabel Lee was chosen because it was a Poem by Edgar Allan Poe who was born in Baltimore, MD, where the phage was isolated |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 22, 2024 |
Sequencing Facility | HHMI SEAquencing Core |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 10692 |
Genome length (bp) | 39635 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCTACGGCAT |
GC Content | 58.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | FR |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | University of Ibadan |
Annotation Status | In GenBank |
Plaque Notes | Medium size clear plaques. |
Number of Genes | 69 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PV940993 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
GenBank File for Phamerator | Download |