| Detailed Information for Phage Applejacks | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Ashley Jack, Kylie Caradori |
| Year Found | 2025 |
| Location Found | Lincoln, NE United States |
| Finding Institution | Doane University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.730363 N, 96.643081 W Map |
| Discovery Notes | This phage was found in Lincoln, Nebraska in Ashley's backyard near a tree. |
| Naming Notes | This name was chosen because Applejacks is a good cereal and it includes a last name. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 20, 2026 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 1575 |
| Genome length (bp) | 42509 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | TCCGCCGGTCT |
| GC Content | 68.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CD |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Doane University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2026) |
| Plaque Notes | The phage morphology is a Siphoviridae with a capsid size of 65nm and tail length of 220nm. |
| Morphotype | Siphoviridae |
| Number of Genes | 63 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewApplejacks_1 Applejacks_2 Applejacks_3 Applejacks_4 Applejacks_5 Applejacks_6 Applejacks_7 Applejacks_8 Applejacks_9 Applejacks_10 Applejacks_11 Applejacks_12 Applejacks_13 Applejacks_14 Applejacks_15 Applejacks_16 Applejacks_17 Applejacks_18 Applejacks_19 Applejacks_20 Applejacks_21 Applejacks_22 Applejacks_23 Applejacks_24 Applejacks_25 Applejacks_26 Applejacks_27 Applejacks_28 Applejacks_29 Applejacks_30 Applejacks_31 Applejacks_32 Applejacks_33 Applejacks_34 Applejacks_35 Applejacks_36 Applejacks_37 Applejacks_38 Applejacks_39 Applejacks_40 Applejacks_41 Applejacks_42 Applejacks_43 Applejacks_44 Applejacks_45 Applejacks_46 Applejacks_47 Applejacks_48 Applejacks_49 Applejacks_50 Applejacks_51 Applejacks_52 Applejacks_53 Applejacks_54 Applejacks_55 Applejacks_56 Applejacks_57 Applejacks_58 Applejacks_59 Applejacks_60 Applejacks_61 Applejacks_62 Applejacks_63 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |