Mycobacterium phage Coffean
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| Detailed Information for Phage Coffean | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Amanda Zeigler |
| Year Found | 2014 |
| Location Found | Oxford, OH USA |
| Finding Institution | Miami University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 39.508686 N, 84.731928 W Map |
| Discovery Notes | Samples were taken from damp soil (due to rain from the previous night) found under many dead and possibly decaying poison ivy leaves. |
| Naming Notes | The phage was named after the synthesis of the word "coffee bean" due to its capsid protein appearance. When observing the phage using a TEM, the heads appeared slightly deflated and more oblong, giving it the look of a coffee bean. |
| Sequencing Information | |
| Sequencing Complete? | No |
| Genome length (bp) | Unknown |
| Character of genome ends | Unknown |
| Fasta file available? | No |
| Characterization | |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | Not sequenced |
| Plaque Notes | The plaque morphology contained various sized circles ranging from small to medium in diameter, and all lytic. |
| Has been Phamerated? | No |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 4.7x10^11 pfu/mL |
| Date of SEA Lysate Titering | Oct 27, 2014 |
| Pitt Freezer Box# | 24 |
| Pitt Freezer Box Grid# | D10 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |