Microbacterium phage DoTi
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| Detailed Information for Phage DoTi | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Elaine Beltran |
| Year Found | 2021 |
| Location Found | Edinburg, TX USA |
| Finding Institution | South Texas College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 26.30119 N, 98.19797 W Map |
| Discovery Notes | Found in my grandmas garden. |
| Naming Notes | DoTi is named after my great grandmother who always encouraged me to study as hard as I could, so I could reach my dreams. Domitila - (Do)mi(Ti)la |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 20, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 216 |
| Genome length (bp) | 54083 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EM |
| Subcluster | EM1 |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | South Texas College |
| Annotation Status | In GenBank |
| Number of Genes | 49 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewDoTi_1 DoTi_2 DoTi_3 DoTi_4 DoTi_5 DoTi_6 DoTi_7 DoTi_8 DoTi_9 DoTi_10 DoTi_11 DoTi_12 DoTi_13 DoTi_14 DoTi_15 DoTi_16 DoTi_17 DoTi_18 DoTi_19 DoTi_20 DoTi_21 DoTi_22 DoTi_23 DoTi_24 DoTi_25 DoTi_26 DoTi_27 DoTi_28 DoTi_29 DoTi_30 DoTi_31 DoTi_32 DoTi_33 DoTi_34 DoTi_35 DoTi_36 DoTi_37 DoTi_38 DoTi_39 DoTi_40 DoTi_41 DoTi_42 DoTi_43 DoTi_44 DoTi_45 DoTi_46 DoTi_47 DoTi_48 DoTi_49 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | ON526980 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 136 |
| Pitt Freezer Box Grid# | C11 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
