Detailed Information for Phage Grumio | |
Discovery Information | |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Hailey Dean |
Year Found | 2024 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.444153 N, 79.962461 W Map |
Discovery Notes | Grumio was found by Hailey Dean on the University of Pittsburgh campus. It was collected from a flower bed in a city. It is surrounded by the rest of the flower bed and pavement. It was rainy that day, so the soil was dark, a little wet, clumpy, and maybe contained some mulch, sticks, and debris. |
Naming Notes | The name, "Grumio," was a creative name that Hailey Dean developed with her group mates. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 29, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 1823 |
Genome length (bp) | 57796 |
Character of genome ends | Circularly Permuted |
GC Content | 65.5% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | CP |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | University of Pittsburgh |
Annotation Status | Being Annotated (Expected completion by 2/28/2026) |
Number of Genes | 93 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewGrumio_1 Grumio_2 Grumio_3 Grumio_4 Grumio_5 Grumio_6 Grumio_7 Grumio_8 Grumio_9 Grumio_10 Grumio_11 Grumio_12 Grumio_13 Grumio_14 Grumio_15 Grumio_16 Grumio_17 Grumio_18 Grumio_19 Grumio_20 Grumio_21 Grumio_22 Grumio_23 Grumio_24 Grumio_25 Grumio_26 Grumio_27 Grumio_28 Grumio_29 Grumio_30 Grumio_31 Grumio_32 Grumio_33 Grumio_34 Grumio_35 Grumio_36 Grumio_37 Grumio_38 Grumio_39 Grumio_40 Grumio_41 Grumio_42 Grumio_43 Grumio_44 Grumio_45 Grumio_46 Grumio_47 Grumio_48 Grumio_49 Grumio_50 Grumio_51 Grumio_52 Grumio_53 Grumio_54 Grumio_55 Grumio_56 Grumio_57 Grumio_58 Grumio_59 Grumio_60 Grumio_61 Grumio_62 Grumio_63 Grumio_64 Grumio_65 Grumio_66 Grumio_67 Grumio_68 Grumio_69 Grumio_70 Grumio_71 Grumio_72 Grumio_73 Grumio_74 Grumio_75 Grumio_76 Grumio_77 Grumio_78 Grumio_79 Grumio_80 Grumio_81 Grumio_82 Grumio_83 Grumio_84 Grumio_85 Grumio_86 Grumio_87 Grumio_88 Grumio_89 Grumio_90 Grumio_91 Grumio_92 Grumio_93 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |