Microbacterium phage Gshelby23
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| Detailed Information for Phage Gshelby23 | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Sadie Gilmeister |
| Year Found | 2021 |
| Location Found | Storm Lake, IA United States of America |
| Finding Institution | Northwestern College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 21°C |
| GPS Coordinates | 42.6615 N, 95.0975 W Map |
| Discovery Notes | Soil type: Garden soil found near the roots of growing plants. Soil depth: 2 inches Soil moisture: Damp, rainfall within 12 hours Soil collected: 8/21/21 |
| Naming Notes | Gshelby23 Shelby was the name of my first dog. The "G" stands for golden retriever, and 23 is my birthday |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 16, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 118 |
| Genome length (bp) | 53603 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EM |
| Subcluster | EM1 |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | Northwestern College |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are relatively spaced out that you are able to count them. They vary in size from extremely small to larger. All plaques appear circular. Some of the larger plaques appear to have halos in the center of them. |
| Morphotype | Podoviridae |
| Number of Genes | 47 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | ON260817 |
| Refseq Number | None yet |
| Published in Paper | Bastian et al 2022, Microbiology Resource Announcements: Complete Genome Sequences of Microbacterium Phages Clayda5 and Gshelby23 and Gordonia Phages Wrigley and Santhid |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 137 |
| Pitt Freezer Box Grid# | A6 |
| Available Files | |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
