Gordonia phage Jeanie
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| Detailed Information for Phage Jeanie | |
| Discovery Information | |
| Isolation Host | Gordonia neofelifaecis NRRL 59395 |
| Found By | Ann-Catherine Stanton |
| Year Found | 2015 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.443303 N, 79.952388 W Map |
| Discovery Notes | The soil was found in a puddle in Schenly plaza. It was muddy soil. |
| Naming Notes | This is named after my grandmother, Jean, and my middle name. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 29, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 8821 |
| Genome length (bp) | 17118 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | AGCCCCCGGT |
| End Determination Notes | Buildup of shotgun reads, with 10 bp drop in coverage between them. |
| GC Content | 68.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CW |
| Subcluster | CW1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are about 0.5 mm in diameter, They are hard to see, but are clear. |
| Morphotype | Siphoviridae |
| Number of Genes | 27 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewJeanie_1 Jeanie_2 Jeanie_3 Jeanie_4 Jeanie_5 Jeanie_6 Jeanie_7 Jeanie_8 Jeanie_9 Jeanie_10 Jeanie_11 Jeanie_12 Jeanie_13 Jeanie_14 Jeanie_15 Jeanie_16 Jeanie_17 Jeanie_18 Jeanie_19 Jeanie_20 Jeanie_21 Jeanie_22 Jeanie_23 Jeanie_24 Jeanie_25 Jeanie_26 Jeanie_27 |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU998256 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 4 |
| Pitt Freezer Box Grid# | H7 |
| Available Files | |
| Plaque Picture | Download |
| Final DNAMaster File | Download |