Rhodococcus phage Jflix2
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Detailed Information for Phage Jflix2
Discovery Information
Isolation HostRhodococcus equi NRRL B-16538
Found ByJason Churu
Year Found2022
Location FoundGrand RAPIDS, MI United States
Finding InstitutionCalvin University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates42.927 N, 85.588 W Map
Discovery Notes-name discovered during thanksgiving break while watching stranger things on Netflix.
Naming NotesName derived from "Netflix", where "Net" is replaced by "J" to form "Jflix".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 15, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1635
Genome length (bp)62017
Character of genome ends3' Sticky Overhang
Overhang Length6 bases
Overhang SequenceCCCGCT
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCF
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionCalvin University
Annotation StatusIn GenBank
Plaque Notes-Length of tail is approximately 300.0nm
-Size of the head is approximately 80-90nm in diameter.
MorphotypeSiphoviridae
Number of Genes106
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Jflix2_1
(thymidylate synthase)

Jflix2_2

Jflix2_3
(minor tail protein)

Jflix2_4
(minor tail protein)

Jflix2_5

Jflix2_6

Jflix2_7

Jflix2_8
(terminase large subunit)

Jflix2_9

Jflix2_10
(portal protein)

Jflix2_11
(major capsid and protease fusion protein)

Jflix2_12
(head-to-tail adaptor)

Jflix2_13
(minor tail protein)

Jflix2_14

Jflix2_15

Jflix2_16
(major tail protein)

Jflix2_17

Jflix2_18
(tail assembly chaperone)

Jflix2_19
(tail assembly chaperone)

Jflix2_20
(tape measure protein)

Jflix2_21
(minor tail protein)

Jflix2_22
(minor tail protein)

Jflix2_23

Jflix2_24
(minor tail protein)

Jflix2_25
(HNH endonuclease)

Jflix2_26
(endolysin)

Jflix2_27
(holin)

Jflix2_28

Jflix2_29
(DNA binding protein)

Jflix2_30

Jflix2_31

Jflix2_32

Jflix2_33

Jflix2_34

Jflix2_35

Jflix2_36

Jflix2_37

Jflix2_38

Jflix2_39

Jflix2_40

Jflix2_41

Jflix2_42

Jflix2_43

Jflix2_44

Jflix2_45

Jflix2_46
(RNA binding protein)

Jflix2_47

Jflix2_48

Jflix2_49

Jflix2_50

Jflix2_51
(serine integrase)

Jflix2_52
(immunity repressor)

Jflix2_53

Jflix2_54

Jflix2_55

Jflix2_56

Jflix2_57

Jflix2_58

Jflix2_59
(WhiB family transcription factor)

Jflix2_60
(Cas4 exonuclease)

Jflix2_61

Jflix2_62

Jflix2_63

Jflix2_64

Jflix2_65

Jflix2_66

Jflix2_67

Jflix2_68

Jflix2_69

Jflix2_70

Jflix2_71
(SSB protein)

Jflix2_72

Jflix2_73

Jflix2_74

Jflix2_75

Jflix2_76

Jflix2_77

Jflix2_78

Jflix2_79

Jflix2_80

Jflix2_81

Jflix2_82

Jflix2_83

Jflix2_84
(BrnT-like toxin)

Jflix2_85

Jflix2_86

Jflix2_87

Jflix2_88

Jflix2_89

Jflix2_90

Jflix2_91

Jflix2_92
(RepA-like helicase)

Jflix2_93

Jflix2_94

Jflix2_95
(RepA-like replication initiator)

Jflix2_96

Jflix2_97
(endonuclease VII)

Jflix2_98

Jflix2_99
(serine hydrolase)

Jflix2_100
(helix-turn-helix DNA binding domain protein)

Jflix2_101
(DNA binding protein)

Jflix2_102

Jflix2_103

Jflix2_104
(glycosyltransferase)

Jflix2_105

Jflix2_106

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOQ938594
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 162
Pitt Freezer Box Grid# E6
Available Files
GenBank File for PhameratorDownload