| Detailed Information for Phage JoyLin |
| Discovery Information |
| Isolation Host | Curtobacterium flaccumfaciens NRRL B-729 SEA |
| Found By | Theresa Chiu |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.442808 N, 79.963726 W Map |
| Discovery Notes | Found in the soil under a tree next to Salk Hall & Pavilion |
| Naming Notes | Named after my mother, who is the reason I'm here today.
Annotated by T. Chiu. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 13, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 5742 |
| Genome length (bp) | 57226 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCCAGCC |
| GC Content | 59.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | JA |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Round, circular clear plaques. Some have faint trails. |
| Number of Genes | 85 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ868962 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| SEA Lysate Titer |
1.5*10^10 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| Virtual Digest Picture | Download |
| GenBank File for Phamerator | Download |
