Arthrobacter phage Kikiko
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| Detailed Information for Phage Kikiko | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis NRRL B-2880 |
| Found By | Abdul Karim Halal |
| Year Found | 2022 |
| Location Found | Nepean, Canada |
| Finding Institution | University of Ottawa |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 14°C |
| GPS Coordinates | 45.4161 N, 75.6702 W Map |
| Discovery Notes | Soil sample was collected from the Rideau River walkway underneath Lees station. Soil is collected 5cm below the surface and at an ambient temperature of 14 degrees Celsius. |
| Naming Notes | Phage name is inspired by a nickname given to me by one of my childhood friends followed by the letters "ko" as a way for stylistic purposes. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 6, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 45 |
| Genome length (bp) | 53980 |
| Character of genome ends | Circularly Permuted |
| GC Content | 59.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EM |
| Subcluster | EM2 |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | University of Ottawa |
| Annotation Status | Overdue (Expected completion by 8/31/2024) |
| Plaque Notes | Observed plaques are small in diameter and clear in appearance. |
| Morphotype | Podoviridae |
| Number of Genes | 48 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewKikiko_1 Kikiko_2 Kikiko_3 Kikiko_4 Kikiko_5 Kikiko_6 Kikiko_7 Kikiko_8 Kikiko_9 Kikiko_10 Kikiko_11 Kikiko_12 Kikiko_13 Kikiko_14 Kikiko_15 Kikiko_16 Kikiko_17 Kikiko_18 Kikiko_19 Kikiko_20 Kikiko_21 Kikiko_22 Kikiko_23 Kikiko_24 Kikiko_25 Kikiko_26 Kikiko_27 Kikiko_28 Kikiko_29 Kikiko_30 Kikiko_31 Kikiko_32 Kikiko_33 Kikiko_34 Kikiko_35 Kikiko_36 Kikiko_37 Kikiko_38 Kikiko_39 Kikiko_40 Kikiko_41 Kikiko_42 Kikiko_43 Kikiko_44 Kikiko_45 Kikiko_46 Kikiko_47 Kikiko_48 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 154 |
| Pitt Freezer Box Grid# | D12 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
