| Detailed Information for Phage MakCheese | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Haley, Jasmine, Calli |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.44 N, 79.96 W Map |
| Discovery Notes | This phage was found by Calli Sophocles, Haley Chung, and Jasmine Patel. The soil was collected next to a college dorm, next to pavement in a mulched area. The sample was dark brown and moist. |
| Naming Notes | Our name is MakCheese because the plate contains orange agar with bacterial colonies throughout. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 4842 |
| Genome length (bp) | 51271 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | TGCCAGCGGTA |
| GC Content | 65.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DW |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 1/30/2026) |
| Plaque Notes | The plaques were very small and dark, and spread evenly throughout agar plates. |
| Morphotype | Siphoviridae |
| Number of Genes | 84 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewMakCheese_1 MakCheese_2 MakCheese_3 MakCheese_4 MakCheese_5 MakCheese_6 MakCheese_7 MakCheese_8 MakCheese_9 MakCheese_10 MakCheese_11 MakCheese_12 MakCheese_13 MakCheese_14 MakCheese_15 MakCheese_16 MakCheese_17 MakCheese_18 MakCheese_19 MakCheese_20 MakCheese_21 MakCheese_22 MakCheese_23 MakCheese_24 MakCheese_25 MakCheese_26 MakCheese_27 MakCheese_28 MakCheese_29 MakCheese_30 MakCheese_31 MakCheese_32 MakCheese_33 MakCheese_34 MakCheese_35 MakCheese_36 MakCheese_37 MakCheese_38 MakCheese_39 MakCheese_40 MakCheese_41 MakCheese_42 MakCheese_43 MakCheese_44 MakCheese_45 MakCheese_46 MakCheese_47 MakCheese_48 MakCheese_49 MakCheese_50 MakCheese_51 MakCheese_52 MakCheese_53 MakCheese_54 MakCheese_55 MakCheese_56 MakCheese_57 MakCheese_58 MakCheese_59 MakCheese_60 MakCheese_61 MakCheese_62 MakCheese_63 MakCheese_64 MakCheese_65 MakCheese_66 MakCheese_67 MakCheese_68 MakCheese_69 MakCheese_70 MakCheese_71 MakCheese_72 MakCheese_73 MakCheese_74 MakCheese_75 MakCheese_76 MakCheese_77 MakCheese_78 MakCheese_79 MakCheese_80 MakCheese_81 MakCheese_82 MakCheese_83 MakCheese_84 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 189 |
| Pitt Freezer Box Grid# | B1 |