| Detailed Information for Phage Nairb | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Brian Davis |
| Year Found | 2016 |
| Location Found | Atlanta, GA USA |
| Finding Institution | Morehouse College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 31°C |
| GPS Coordinates | 33.749 N, 84.4146 W Map |
| Discovery Notes | I found this phage at a temperature of 87 degrees Fahrenheit. The area I picked from was a dry area. To get this sample I picked into the ground a bit for moisture because I knew it rained the day before. |
| Naming Notes | The name of my phage came from my name. My name is Brian and I named my phage Nairb, which is my name spelled backwards. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 6, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 4472 |
| Genome length (bp) | 42393 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGAAACGCCAT |
| GC Content | 66.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | T |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to View |
| Annotating Institution | Morehouse College |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 59 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewNairb_1 Nairb_2 Nairb_3 Nairb_4 Nairb_5 Nairb_6 Nairb_7 Nairb_8 Nairb_9 Nairb_10 Nairb_11 Nairb_12 Nairb_13 Nairb_14 Nairb_15 Nairb_16 Nairb_17 Nairb_18 Nairb_19 Nairb_20 Nairb_21 Nairb_22 Nairb_23 Nairb_24 Nairb_25 Nairb_26 Nairb_27 Nairb_28 Nairb_29 Nairb_30 Nairb_31 Nairb_32 Nairb_33 Nairb_34 Nairb_35 Nairb_36 Nairb_37 Nairb_38 Nairb_39 Nairb_40 Nairb_41 Nairb_42 Nairb_43 Nairb_44 Nairb_45 Nairb_46 Nairb_47 Nairb_48 Nairb_49 Nairb_50 Nairb_51 Nairb_52 Nairb_53 Nairb_54 Nairb_55 Nairb_56 Nairb_57 Nairb_58 Nairb_59 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH001451 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 39 |
| Pitt Freezer Box Grid# | H11 |
| Available Files | |
| Plaque Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |