| Detailed Information for Phage Nova53 |
| Discovery Information |
| Isolation Host | Rhodococcus equi NRRL B-16538 |
| Found By | Ella Woolworth |
| Year Found | 2024 |
| Location Found | Grand Rapids, MI United States |
| Finding Institution | Calvin University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 42.930479 N, 85.58862 W Map |
| Discovery Notes | This soil this phage was found in was collected on Calvin University's Commons Lawn. It was collected underneath the giant pine tree next to the sidewalk leading into the science building. The dirt in the soil sample was moist as it was gathered from an irrigated area. It also seemed to be very rich as it wasn't sandy or rocky. |
| Naming Notes | This name was inspired by my dog's name, Nova, combined with my favorite number, 53. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 8, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 1111 |
| Genome length (bp) | 137941 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 5222 bp |
| GC Content | 48.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CG |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | Calvin University |
| Annotation Status | In GenBank |
| Number of Genes | 250 |
| Number of tRNAs | 31 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PV876963 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
198 |
| Pitt Freezer Box Grid# |
H3 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
