Gordonia phage Nymeria
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Duplicate of Nymphadora
After sequencing, this phage's genome was found to be 100% identical to that of phage Nymphadora. Since they're both from Pitt, it's likely this is a lab contaminant.
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| Detailed Information for Phage Nymeria | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | William McFadden Jr. |
| Year Found | 2015 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.44206 N, 79.954035 W Map |
| Discovery Notes | 80°F, 50% Humidity, 9:30pm on September 7th 2015, used in lab on 9/8/15 10:30am |
| Naming Notes | Its from my favorite show Game of Thrones, and my favorite character Arya's long lost dog Nymeria, who was named after a warrior queen from the kingdom of Dorne |
| Sequencing Information | |
| Sequencing Complete? | No |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 525 |
| Sanger Finishing Reactions | 53431 |
| Genome length (bp) | Unknown |
| Character of genome ends | 3' Sticky Overhang |
| Fasta file available? | No |
| Characterization | |
| Cluster | CZ |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | Not sequenced |
| Plaque Notes | Small plaques with occasional halo formation |
| Has been Phamerated? | No |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 2 |
| Pitt Freezer Box Grid# | G10 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
