| Detailed Information for Phage PapayaSalad | |
| Discovery Information | |
| Isolation Host | Streptomyces venezuelae ATCC 10712 |
| Found By | Austin Sivoravong |
| Year Found | 2015 |
| Location Found | Keller, TX USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 32.88458 N, 97.274281 W Map |
| Discovery Notes | Phage isolated from a soil sample in the front yard of my home in Keller, Texas. Soil was light brown, dry, and crumbly. |
| Naming Notes | Papya Salad is a traditional Lao dish and my family is from Laos. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 26, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 976 |
| Genome length (bp) | 38411 |
| Character of genome ends | Circularly Permuted |
| GC Content | 72.6% |
| Sequencing Notes | About 25% of the reads were from a contaminant that matched Chymera 100%. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BC |
| Subcluster | BC3 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Plaque Diameter: .6mm Plaque Texture: Clear Plaque Shape: Circular, round |
| Morphotype | Siphoviridae |
| Number of Genes | 54 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewPapayaSalad_1 PapayaSalad_2 PapayaSalad_3 PapayaSalad_4 PapayaSalad_5 PapayaSalad_6 PapayaSalad_7 PapayaSalad_8 PapayaSalad_9 PapayaSalad_10 PapayaSalad_11 PapayaSalad_12 PapayaSalad_13 PapayaSalad_15 PapayaSalad_14 PapayaSalad_16 PapayaSalad_17 PapayaSalad_18 PapayaSalad_19 PapayaSalad_20 PapayaSalad_21 PapayaSalad_22 PapayaSalad_23 PapayaSalad_24 PapayaSalad_25 PapayaSalad_26 — tRNA PapayaSalad_27 PapayaSalad_28 PapayaSalad_29 PapayaSalad_30 PapayaSalad_31 PapayaSalad_32 PapayaSalad_33 PapayaSalad_34 PapayaSalad_35 PapayaSalad_36 PapayaSalad_37 PapayaSalad_38 PapayaSalad_39 PapayaSalad_40 PapayaSalad_41 PapayaSalad_42 PapayaSalad_43 PapayaSalad_44 PapayaSalad_45 PapayaSalad_46 PapayaSalad_47 PapayaSalad_48 PapayaSalad_49 PapayaSalad_50 PapayaSalad_51 PapayaSalad_52 PapayaSalad_53 PapayaSalad_54 PapayaSalad_55 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KY092481 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 2.4x10^9 pfu/ml |
| Date of SEA Lysate Titering | Nov 15, 2015 |
| Pitt Freezer Box# | 20 |
| Pitt Freezer Box Grid# | E12 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |