Arthrobacter phage PrairieDogTown
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Detailed Information for Phage PrairieDogTown
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Duplicates of this PhageSwampGas
Found ByArya Sreenivas
Year Found2024
Location FoundLubbock, TX USA
Finding InstitutionTexas Tech University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates33.58793 N, 101.87308 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 13, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage3431
Genome length (bp)36233
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTTCGCCCGGTA
GC Content68.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFO
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionTexas Tech University
Annotation StatusIn GenBank
Plaque Noteslytic
MorphotypeSiphoviridae
Number of Genes52
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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PrairieDogTown_1

PrairieDogTown_2
(helix-turn-helix DNA binding domain)

PrairieDogTown_3
(terminase)

PrairieDogTown_4
(RNA binding protein)

PrairieDogTown_5
(portal protein)

PrairieDogTown_6
(capsid maturation protease)

PrairieDogTown_7
(major capsid protein)

PrairieDogTown_8

PrairieDogTown_9
(head-to-tail adaptor)

PrairieDogTown_10
(head-to-tail stopper)

PrairieDogTown_11

PrairieDogTown_12
(tail terminator)

PrairieDogTown_13
(major tail protein)

PrairieDogTown_14

PrairieDogTown_15
(tail assembly chaperone)

PrairieDogTown_16
(tail assembly chaperone)

PrairieDogTown_17
(tape measure protein)

PrairieDogTown_18
(minor tail protein)

PrairieDogTown_19
(minor tail protein)

PrairieDogTown_20
(minor tail protein)

PrairieDogTown_21
(minor tail protein)

PrairieDogTown_22

PrairieDogTown_23

PrairieDogTown_24

PrairieDogTown_25
(endolysin)

PrairieDogTown_26

PrairieDogTown_27
(helix-turn-helix DNA binding domain)

PrairieDogTown_28

PrairieDogTown_29

PrairieDogTown_30

PrairieDogTown_31

PrairieDogTown_32
(helix-turn-helix DNA binding domain)

PrairieDogTown_33
(helix-turn-helix DNA binding domain)

PrairieDogTown_34

PrairieDogTown_35

PrairieDogTown_36
(DNA methyltransferase)

PrairieDogTown_37

PrairieDogTown_38

PrairieDogTown_39

PrairieDogTown_40

PrairieDogTown_41

PrairieDogTown_42

PrairieDogTown_43
(HNH endonuclease)

PrairieDogTown_44

PrairieDogTown_45

PrairieDogTown_46
(VRR-Nuc domain protein)

PrairieDogTown_47

PrairieDogTown_48

PrairieDogTown_49

PrairieDogTown_50

PrairieDogTown_51
(helix-turn-helix DNA binding domain)

PrairieDogTown_52
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV876925
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.7x10^8 pfu/mL
Pitt Freezer Box# 212
Pitt Freezer Box Grid# G11
Available Files
GenBank File for PhameratorDownload