Mycobacterium phage Reaper
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Detailed Information for Phage Reaper | |
Discovery Information | |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Khue Tran |
Year Found | 2012 |
Location Found | La Jolla, CA USA |
Finding Institution | University of California, San Diego |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 32.872222 N, 117.256389 W Map |
Discovery Notes | Sun facing compost bins; vermicomposting bin on far left in Roger's community garden. Mild weather, warm, slight breeze. Compost bin soil rich and dark; sample collected under rotting apple, moist. Bin full of vegetables; fruit flies, fruit fly larvae on apple, ants, open air. Rotting vegetation included: lettuce, lemon skin, corn. |
Naming Notes | This phage creates very large plaques, around 6-8 mm in diameter; even a 1/25 lysate created near perfect web lysis. In keeping with its prolific lysing, I named it Reaper. |
Sequencing Information | |
Sequencing Complete? | No |
Genome length (bp) | Unknown |
Character of genome ends | Unknown |
Fasta file available? | No |
Characterization | |
Cluster | Unclustered |
Subcluster | -- |
Annotating Institution | Unknown or unassigned |
Annotation Status | Not sequenced |
Plaque Notes | Size (mm): 6 mm Appearance: Clear Incubation time (h): 24 Incubation temp (°C): 37 |
Morphotype | Siphoviridae |
Has been Phamerated? | No |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
SEA Lysate Titer | 4.0 x 10^10 pfu/mL |
Date of SEA Lysate Titering | Nov 2, 2012 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |