| Detailed Information for Phage RegnumDei | |
| Discovery Information | |
| Isolation Host | Rhodococcus equi NRRL B-16538 |
| Found By | Riley Cornwell |
| Year Found | 2024 |
| Location Found | Grand Rapids, MI United States |
| Finding Institution | Calvin University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 42.93405 N, 85.58685 W Map |
| Discovery Notes | The phage was discovered on Calvin University's Grand Rapids campus on September 18, 2024. The climate was 80 degrees Fahrenheit and dry in contrast to humid. The soil was incredibly dry, tightly packed together and had to be loosened, but overall homogenous except for a few non-soil clumps (rocks, leaves, etc). It was located near a well-worn walking path and trees. |
| Naming Notes | The name RegnumDei translates to "Kingdom of God." This name came from the Latin language. It stands to advocate for the Christian God as Creator of all things. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jun 11, 2025 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NovaSeq X Plus |
| Read Type | Paired-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 6616 |
| Genome length (bp) | 64339 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 5 bases |
| Overhang Sequence | CCACT |
| GC Content | 63.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CF |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | Calvin University |
| Annotation Status | Being Annotated (Expected completion by 12/11/2025) |
| Plaque Notes | The plaques were not clearly lytic or temperate. Their incredibly small size (indicating small burst size, slightly less than a millimeter in diameter) makes a conclusion on lytic or temperate difficult at this point in the process. The average plaque was well-rounded and distinct. |
| Number of Genes | 120 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewRegnumDei_1 RegnumDei_2 RegnumDei_3 RegnumDei_4 RegnumDei_5 RegnumDei_6 RegnumDei_7 RegnumDei_8 RegnumDei_9 RegnumDei_10 RegnumDei_11 RegnumDei_12 RegnumDei_13 RegnumDei_14 RegnumDei_15 RegnumDei_16 RegnumDei_17 RegnumDei_18 RegnumDei_19 RegnumDei_20 RegnumDei_21 RegnumDei_22 RegnumDei_23 RegnumDei_24 RegnumDei_25 RegnumDei_26 RegnumDei_27 RegnumDei_28 RegnumDei_29 RegnumDei_30 RegnumDei_31 RegnumDei_32 RegnumDei_33 RegnumDei_34 RegnumDei_35 RegnumDei_36 RegnumDei_37 RegnumDei_38 RegnumDei_39 RegnumDei_40 RegnumDei_41 RegnumDei_42 RegnumDei_43 RegnumDei_44 RegnumDei_45 RegnumDei_46 RegnumDei_47 RegnumDei_48 RegnumDei_49 RegnumDei_50 RegnumDei_51 RegnumDei_52 RegnumDei_53 RegnumDei_54 RegnumDei_55 RegnumDei_56 RegnumDei_57 RegnumDei_58 RegnumDei_59 RegnumDei_60 RegnumDei_61 RegnumDei_62 RegnumDei_63 RegnumDei_64 RegnumDei_65 RegnumDei_66 RegnumDei_67 RegnumDei_68 RegnumDei_69 RegnumDei_70 RegnumDei_71 RegnumDei_72 RegnumDei_73 RegnumDei_74 RegnumDei_75 RegnumDei_76 RegnumDei_77 RegnumDei_78 RegnumDei_79 RegnumDei_80 RegnumDei_81 RegnumDei_82 RegnumDei_83 RegnumDei_84 RegnumDei_85 RegnumDei_86 RegnumDei_87 RegnumDei_88 RegnumDei_89 RegnumDei_90 RegnumDei_91 RegnumDei_92 RegnumDei_93 RegnumDei_94 RegnumDei_95 RegnumDei_96 RegnumDei_97 RegnumDei_98 RegnumDei_99 RegnumDei_100 RegnumDei_101 RegnumDei_102 RegnumDei_103 RegnumDei_104 RegnumDei_105 RegnumDei_106 RegnumDei_107 RegnumDei_108 RegnumDei_109 RegnumDei_110 RegnumDei_111 RegnumDei_112 RegnumDei_113 RegnumDei_114 RegnumDei_115 RegnumDei_116 RegnumDei_117 RegnumDei_118 RegnumDei_119 RegnumDei_120 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 198 |
| Pitt Freezer Box Grid# | H6 |