| Detailed Information for Phage Sbash | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Sbahle Msani |
| Year Found | 2013 |
| Location Found | Durban, South Africa |
| Finding Institution | University of Kwazulu-Natal |
| Program | Mycobacterial Genetics Course, Durban, South Africa |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 30.945076 E, 29.817568 S Map |
| Discovery Notes | I got the soil sample from the Campus on the flower garden behind G block. |
| Naming Notes | The name of my phage is my nickname that is Sbash |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 15, 2014 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Ion Torrent |
| Approximate Shotgun Coverage | 1253 |
| Sanger Finishing Reactions | 2 |
| Genome length (bp) | 55832 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CCCGCCCCCT |
| GC Content | 65.6% |
| Sequencing Notes | upon annotation, a 6 G string was modified to 5. (~48640 or so.) fasta file was replaced 10/3/14, modifying the header. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | I |
| Subcluster | I2 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | small sized and round shaped |
| Morphotype | Siphoviridae |
| Number of Genes | 89 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewSbash_1 Sbash_2 Sbash_3 Sbash_4 Sbash_5 Sbash_6 Sbash_7 Sbash_8 Sbash_9 Sbash_10 Sbash_11 Sbash_12 Sbash_13 Sbash_14 Sbash_15 Sbash_16 Sbash_17 Sbash_18 Sbash_19 Sbash_20 Sbash_21 Sbash_22 Sbash_23 Sbash_24 Sbash_25 Sbash_26 Sbash_27 Sbash_28 Sbash_29 Sbash_30 Sbash_31 Sbash_32 Sbash_33 Sbash_34 Sbash_35 Sbash_36 Sbash_37 Sbash_38 Sbash_39 Sbash_40 Sbash_41 Sbash_42 Sbash_43 Sbash_44 Sbash_45 Sbash_46 Sbash_47 Sbash_48 Sbash_49 Sbash_50 Sbash_51 Sbash_52 Sbash_53 Sbash_54 Sbash_55 Sbash_56 Sbash_57 Sbash_58 Sbash_59 Sbash_60 Sbash_61 Sbash_62 Sbash_63 Sbash_64 Sbash_65 Sbash_66 Sbash_67 Sbash_68 Sbash_69 Sbash_70 Sbash_71 Sbash_72 Sbash_73 Sbash_74 Sbash_75 Sbash_76 Sbash_77 Sbash_78 Sbash_79 Sbash_80 Sbash_81 Sbash_82 Sbash_83 Sbash_84 Sbash_85 Sbash_86 Sbash_87 Sbash_88 Sbash_89 |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KP027201 |
| Refseq Number | NC_026589 |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 7 |
| Pitt Freezer Box Grid# | E11 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |