| Detailed Information for Phage Shoya | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Shawna Larson, Moya Murray |
| Year Found | 2018 |
| Location Found | River Falls, WI USA |
| Finding Institution | University of Wisconsin-River Falls |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 28°C |
| GPS Coordinates | 44.851966 N, 92.623259 W Map |
| Discovery Notes | Date: 9/9/18 Soil condition: moist, loose, dark Air temp: 72F Weather condition: clear, low humidity Other: collected very close to water We borrowed a phage from Josh Rolfs |
| Naming Notes | We created the name for this phage by combining our names together, Moya and Shawna. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 19, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 63 |
| Genome length (bp) | 37783 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | TCCGCCCGGTA |
| GC Content | 63.7% |
| Sequencing Notes | This phage was sequenced as part of a DOGEMS sample, then the sequence was matched to the lysate by PCR. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | FB |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
Click to View |
| Annotating Institution | University of Wisconsin-River Falls |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques look evenly spaced out filling most of the space in the container. size: bigger than most A-glob plaque results cloudy: yes halo: yes uniform: yes |
| Morphotype | Siphoviridae |
| Number of Genes | 67 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewShoya_1 Shoya_2 Shoya_3 Shoya_4 Shoya_5 Shoya_6 Shoya_7 Shoya_8 Shoya_9 Shoya_10 Shoya_11 Shoya_12 Shoya_13 Shoya_14 Shoya_15 Shoya_16 Shoya_17 Shoya_18 Shoya_19 Shoya_20 Shoya_21 Shoya_22 Shoya_23 Shoya_24 Shoya_25 Shoya_26 Shoya_27 Shoya_28 Shoya_29 Shoya_30 Shoya_31 Shoya_32 Shoya_33 Shoya_34 Shoya_35 Shoya_36 Shoya_37 Shoya_38 Shoya_39 Shoya_40 Shoya_41 Shoya_42 Shoya_43 Shoya_44 Shoya_45 Shoya_46 Shoya_47 Shoya_48 Shoya_49 Shoya_50 Shoya_51 Shoya_52 Shoya_53 Shoya_54 Shoya_55 Shoya_56 Shoya_57 Shoya_58 Shoya_59 Shoya_60 Shoya_61 Shoya_62 Shoya_63 Shoya_64 Shoya_65 Shoya_66 Shoya_67 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN908684 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 88 |
| Pitt Freezer Box Grid# | A11 |
| Available Files | |
| GenBank File for Phamerator | Download |