Microbacterium phage Smelly
Add or modify phage thumbnail images to appear at the top of this page.
Know something about this phage that we don't? Modify its data.
| Detailed Information for Phage Smelly | |
| Discovery Information | |
| Isolation Host | Microbacterium paraoxydans NRRL B-24275 |
| Found By | Mason Kim |
| Year Found | 2024 |
| Location Found | Riverside, CA United States |
| Finding Institution | La Sierra University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 19°C |
| GPS Coordinates | 33.90738 N, 117.50807 W Map |
| Discovery Notes | The soil was dark brownish black and damp from the surface. The surface soil was full of organic matter, with vegetation and weeds. The soil was collected in a radius of about 3 inches and a depth of about 2 cm. The soil was located underneath a tree, right next to the trunk. In the sample, there is a twig. |
| Naming Notes | The plates that these bacteriophages were on always greeted me with a nose-bleed smell after incubation. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 10907 |
| Genome length (bp) | 17859 |
| Character of genome ends | Covalent Terminal Protein |
| GC Content | 52.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | GK |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | La Sierra University |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques show turbid with a clear halo. Sizes vary from small to pretty small. |
| Number of Genes | 24 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewSmelly_1 Smelly_2 Smelly_3 Smelly_4 Smelly_5 Smelly_6 Smelly_7 Smelly_8 Smelly_9 Smelly_10 Smelly_11 Smelly_12 Smelly_13 Smelly_14 Smelly_15 Smelly_16 Smelly_17 Smelly_18 Smelly_19 Smelly_20 Smelly_21 Smelly_22 Smelly_23 Smelly_24 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PV915830 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 200 |
| Pitt Freezer Box Grid# | C1 |
| Available Files | |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
