| Discovery Information |
| Isolation Host | Streptomyces mirabilis NRRL B-2400 |
| Found By | Soven Kumar and Joel Persaud |
| Year Found | 2022 |
| Location Found | Columbia, MD United States |
| Finding Institution | University of Maryland, Baltimore County |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 25°C |
| GPS Coordinates | 39.182121 N, 76.843525 W Map |
| Discovery Notes | Found at Lake Elkhorn Columbia, MD. The dirt was dry and coarse, the temperature was 25 degrees Celcius when collected. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 23, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2380 |
| Genome length (bp) | 39033 |
| Character of genome ends | Circularly Permuted |
| GC Content | 71.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | BC |
| Subcluster | BC1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of Maryland, Baltimore County |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are typically 2 mm in diameter with slightly turbid and round edges. |
| Morphotype | Siphoviridae |
| Number of Genes | 53 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OQ938586 |
| Refseq Number | None yet |
| Published in Paper | Kumar et al 2024, Microbiology Resource Announcements: Complete genome and characteristics of cluster BC bacteriophage SoJo, isolated using Streptomyces mirabilis NRRL B-2400 in Columbia, MD |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
151 |
| Pitt Freezer Box Grid# |
E2 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
