Detailed Information for Phage ToastyFinz | |
Discovery Information | |
Isolation Host | Streptomyces viridochromogenes DSM40736 |
Found By | Kendra Woodruff & Ivan Ginsberg |
Year Found | 2015 |
Location Found | St. Louis, MO USA |
Finding Institution | Washington University in St. Louis |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 27°C |
GPS Coordinates | 38.633056 N, 90.349167 W Map |
Discovery Notes | Soil had low moisture levels, collected at a depth of 2cm |
Naming Notes | Nickname of one the the researchers working on it. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 23, 2016 |
Sequencing Facility | The McDonnell Genome Institute at Washington University |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 145 |
Genome length (bp) | 39693 |
Character of genome ends | Circularly Permuted |
GC Content | 72.5% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | BC |
Subcluster | BC1 |
Cluster Life Cycle | Temperate |
Other Cluster Members | |
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Clear mid sized plaques, some plaques with inner and outer ring |
Morphotype | Siphoviridae |
Number of Genes | 52 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewToastyFinz_1 ToastyFinz_2 ToastyFinz_3 ToastyFinz_4 ToastyFinz_5 ToastyFinz_6 ToastyFinz_7 ToastyFinz_8 ToastyFinz_9 ToastyFinz_10 ToastyFinz_11 ToastyFinz_12 ToastyFinz_13 ToastyFinz_14 ToastyFinz_15 ToastyFinz_16 ToastyFinz_17 ToastyFinz_18 ToastyFinz_19 ToastyFinz_20 ToastyFinz_21 ToastyFinz_22 ToastyFinz_23 ToastyFinz_24 ToastyFinz_25 ToastyFinz_26 ToastyFinz_27 ToastyFinz_28 ToastyFinz_29 ToastyFinz_30 ToastyFinz_31 ToastyFinz_32 ToastyFinz_33 ToastyFinz_34 ToastyFinz_35 ToastyFinz_36 ToastyFinz_37 ToastyFinz_38 ToastyFinz_39 ToastyFinz_40 ToastyFinz_41 ToastyFinz_42 ToastyFinz_43 ToastyFinz_44 ToastyFinz_45 ToastyFinz_46 ToastyFinz_47 ToastyFinz_48 ToastyFinz_49 ToastyFinz_50 ToastyFinz_51 ToastyFinz_52 |
Submitted Annotation in DNA Master Format | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | KY676784 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
SEA Designator | ToastyFinz |
SEA Lysate Titer | 4.6x108 pfu/mL |
Date of SEA Lysate Titering | Oct 13, 2015 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |