Mycobacterium phage Tomato20
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| Detailed Information for Phage Tomato20 | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Shelby Reid |
| Year Found | 2020 |
| Location Found | Corpus Christi, TX United States |
| Finding Institution | Del Mar College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 27.762 N, 97.4074 W Map |
| Discovery Notes | The soil was obtained on Del Mar Campus in the vegetable garden on 06.23/2020. The weather was humid, cloudy, slightly rainy, and very hot. There was little to no wind. Because It had slightly rained an hour before so the soil was damp and dark. It was covered under the tomato plants and other weeds of the garden. I dug slightly down, about 3-5 inches into the ground to obtain the sample. |
| Naming Notes | I called the phage Tomato20 because I collected the soil around a tomato plant from a vegetable garden. The '20' is from the year. |
| Sequencing Information | |
| Sequencing Complete? | No |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Ion Torrent |
| Genome length (bp) | Unknown |
| Character of genome ends | Unknown |
| Fasta file available? | No |
| Characterization | |
| Cluster | Unclustered |
| Subcluster | -- |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | Not sequenced |
| Plaque Notes | The plaque is lysogenic and has a diameter of about 2 cm. |
| Morphotype | Myoviridae |
| Has been Phamerated? | No |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
