Curtobacterium phage Trapezoid
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| Detailed Information for Phage Trapezoid | |
| Discovery Information | |
| Isolation Host | Curtobacterium flaccumfaciens NRRL B-729 SEA |
| Found By | Noelle McDonald |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.43826 N, 79.912968 W Map |
| Discovery Notes | Found next to a sidewalk under leaves and grass clippings. Plaque picture is after one day incubation. Annotated by Deborah Jacobs-Sera. |
| Naming Notes | Named after the shape |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 14, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 10975 |
| Genome length (bp) | 17681 |
| Character of genome ends | Covalent Terminal Protein |
| GC Content | 57.2% |
| Sequencing Notes | at position 10930 bp 45% of reads contain a C or A instead of consensus G at position 11158 bp 35% of reads contain an A instead of consensus G at position 11355 bp 35% of reads contain a G instead of consensus G |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | JB |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 2/14/2025) |
| Plaque Notes | large haloed plaques |
| Number of Genes | 24 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewTrapezoid_1 Trapezoid_2 Trapezoid_3 Trapezoid_4 Trapezoid_5 Trapezoid_6 Trapezoid_7 Trapezoid_8 Trapezoid_9 Trapezoid_10 Trapezoid_11 Trapezoid_12 Trapezoid_13 Trapezoid_14 Trapezoid_15 Trapezoid_16 Trapezoid_17 Trapezoid_18 Trapezoid_19 Trapezoid_20 Trapezoid_21 Trapezoid_22 Trapezoid_23 Trapezoid_24 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |