Streptomyces phage WheeHeim
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| Detailed Information for Phage WheeHeim | |
| Discovery Information | |
| Isolation Host | Streptomyces scabiei RL-34 |
| Found By | Huynh,Anthony & Morcos,George |
| Year Found | 2017 |
| Location Found | Saigon, Vietnam |
| Finding Institution | University of Maryland, Baltimore County |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 10.77895 N, 106.641625 E Map |
| Discovery Notes | 96% relative humidity, in a park, obtained from the surface, 27°C |
| Naming Notes | Mis-spelling of 'Dangerous' translated into Vietnamese |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 2, 2018 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 10312 |
| Genome length (bp) | 18266 |
| Character of genome ends | Covalent Terminal Protein |
| End Determination Notes | The genome bears similarity to phi29, a classic example of a phage with covalently-linked terminal proteins. There were no reads at all that extended past the contig ends, and there are 24 bp inverted repeats at the ends of the genome. These factors make it very likely that this genome is packaged with covalently-linked terminal proteins. |
| GC Content | 54.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BO |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
Click to View |
| Annotating Institution | University of Maryland, Baltimore County |
| Annotation Status | In GenBank |
| Plaque Notes | Jagged, cloudy 3mm diameter image is post-48 hour incubation at 30 degrees Celsius |
| Morphotype | Tectiviridae |
| Number of Genes | 36 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewWheeHeim_1 WheeHeim_2 WheeHeim_3 WheeHeim_4 WheeHeim_5 WheeHeim_6 WheeHeim_7 — tRNA WheeHeim_8 WheeHeim_9 WheeHeim_10 WheeHeim_11 WheeHeim_12 WheeHeim_13 WheeHeim_14 WheeHeim_15 WheeHeim_16 WheeHeim_17 WheeHeim_18 WheeHeim_19 WheeHeim_20 WheeHeim_21 WheeHeim_22 WheeHeim_23 WheeHeim_24 WheeHeim_25 WheeHeim_26 WheeHeim_27 WheeHeim_28 WheeHeim_29 WheeHeim_31 WheeHeim_32 WheeHeim_33 WheeHeim_34 WheeHeim_35 WheeHeim_36 WheeHeim_37 WheeHeim_38 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK305890 |
| Refseq Number | None yet |
| Published in Paper | Caruso et al. 2019, Viruses: A Novel Genus of Actinobacterial Tectiviridae |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 9.2 x 10^8 pfu/mL |
| Pitt Freezer Box# | 49 |
| Pitt Freezer Box Grid# | H1 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
