| Detailed Information for Phage YDN12 | |
| Discovery Information | |
| Isolation Host | Streptomyces griseus ATCC 10137 |
| Found By | Paul Yvann Djamen, Ly Nguyen |
| Year Found | 2012 |
| Location Found | Richardson, TX USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 32.923056 N, 96.7225 W Map |
| Discovery Notes | Isolated during the UNT-HHMI 2012 Summer Transitions Workshop. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 27, 2014 |
| Sequencing Facility | University of North Texas |
| Shotgun Sequencing Method | Ion Torrent Sequencing |
| Approximate Shotgun Coverage | 196 |
| Sanger Finishing Reactions | 9 |
| Genome length (bp) | 56528 |
| Character of genome ends | Circularly Permuted |
| End Determination Notes | No buildups of reads were found during shotgun sequencing. |
| GC Content | 69.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BG |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 70 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewYDN12_1 YDN12_2 YDN12_3 YDN12_4 YDN12_5 YDN12_6 YDN12_7 YDN12_8 YDN12_9 YDN12_10 YDN12_11 YDN12_12 YDN12_13 YDN12_14 YDN12_15 YDN12_16 YDN12_17 YDN12_18 YDN12_19 YDN12_20 YDN12_22 YDN12_23 YDN12_24 YDN12_25 YDN12_26 YDN12_27 YDN12_28 YDN12_29 YDN12_30 YDN12_31 YDN12_32 YDN12_33 YDN12_34 YDN12_35 YDN12_36 YDN12_37 YDN12_38 YDN12_39 YDN12_40 YDN12_41 YDN12_42 YDN12_43 YDN12_44 YDN12_45 YDN12_46 YDN12_47 YDN12_48 YDN12_49 YDN12_50 YDN12_51 YDN12_52 YDN12_53 YDN12_54 YDN12_55 YDN12_56 YDN12_57 YDN12_58 YDN12_59 YDN12_60 YDN12_61 YDN12_62 YDN12_63 YDN12_64 YDN12_65 YDN12_66 YDN12_67 YDN12_68 YDN12_69 YDN12_70 YDN12_71 |
| Submitted Annotation in DNA Master Format | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KP876465 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Available Files | |
| Restriction Digest Picture | Download |
| EM Picture | Download |