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Mycobacterium phage Yolo
Duplicate of Jovo
After sequencing, this phage had only 2 single nucleotide substitutions as differences from Jovo. Since both samples were collected at the same site, this phage is considered a duplicate isolate of Jovo.
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Detailed Information for Phage Yolo
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesPhageaway
Found ByS. Won, C. To, P. Noe, Y. Kubota
Year Found2012
Location FoundLos Angeles, CA USA
Finding InstitutionUniversity of California, Los Angeles
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates33.015373 N, 118.49964 W Map
Discovery NotesIsolated and annotated by Team Phagealicious: Sohui Taylor Won, Cynthia To, Paul No, and Yuzu Kubota.
Courses: MIMG 103AL (spring 2012) and MIMG 103BL (fall 2012)
Instructor: Erin Sanders
TAs: Shannon Beaty (AL) and Will Villella (BL)
Curators of genome data: Khristina Ipapo (199-W13)
Naming NotesOriginally named Phageaway by discovery team. Renamed Yolo by Shannon Cooper and Khristina Ipapo in Feb. 2013.
Sequencing Information
Sequencing Complete?No
Sequencing FacilityThe UCLA Genotyping and Sequencing Core
Shotgun Sequencing Method454 Pyrosequencing
Genome length (bp)Unknown
Character of genome endsUnknown
Fasta file available?No
Cluster Life CycleTemperate
Lysogeny NotesPhage is lytic based on plaque morphology and presence of peptidase, terminase, and phosphoesterase genes.
Annotating InstitutionUnknown or unassigned
Annotation StatusNot sequenced
Plaque NotesClear plaques with an average diameter of 2.9mm.
Number of Genes83
Number of tRNAs1
Has been Phamerated?No
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2012UCLAphageawayPN
SEA Lysate Titer 2.03x10^10
Date of SEA Lysate Titering May 24, 2012
Pitt Freezer Box# 3
Pitt Freezer Box Grid# E12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload