Gordonia phage Zodiariah
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Detailed Information for Phage Zodiariah
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByCharliste Hampton
Year Found2024
Location FoundAtlanta, GA Fulton
Finding InstitutionSpelman College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates33.778027 N, 84.412136 W Map
Discovery NotesThe soil was dry and found near an area with frequent dog walks.
Naming NotesI named my phage after my emotional support kitten Zodiac Zachariah Hampton.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage558
Genome length (bp)51070
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTGCCAGCGGTA
GC Content65.8%
Sequencing NotesThis sample was sequenced as part of a DOGEMS (deliberately mixed) sample.
Fasta file available?Yes: Download fasta file
Characterization
ClusterDW
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionSpelman College
Annotation StatusIn GenBank
Plaque NotesPlaques are visible and clear.
MorphotypeSiphoviridae
Number of Genes70
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Zodiariah_1
(terminase, small subunit)

Zodiariah_2
(terminase, large subunit)

Zodiariah_3
(portal protein)

Zodiariah_4
(capsid maturation protease)

Zodiariah_5
(scaffolding protein)

Zodiariah_6
(major capsid protein)

Zodiariah_7

Zodiariah_8
(head-to-tail adaptor)

Zodiariah_9
(head-to-tail stopper)

Zodiariah_10
(tail terminator)

Zodiariah_11

Zodiariah_12
(major tail protein)

Zodiariah_13

Zodiariah_14
(tail assembly chaperone)

Zodiariah_15
(tail assembly chaperone)

Zodiariah_16
(tape measure protein)

Zodiariah_17
(minor tail protein)

Zodiariah_18
(minor tail protein)

Zodiariah_19
(minor tail protein)

Zodiariah_20
(minor tail protein)

Zodiariah_21
(minor tail protein)

Zodiariah_22
(minor tail protein)

Zodiariah_23

Zodiariah_24
(lysin A, L-Ala-D-Glu peptidase domain)

Zodiariah_25
(lysin A, glycosyl hydrolase domain)

Zodiariah_26

Zodiariah_27

Zodiariah_28

Zodiariah_29
(lysin B)

Zodiariah_30

Zodiariah_31

Zodiariah_32
(DNA methyltransferase)

Zodiariah_33

Zodiariah_34

Zodiariah_35
(tyrosine integrase)

Zodiariah_36
(tyrosine integrase)

Zodiariah_37

Zodiariah_38
(metalloprotease)

Zodiariah_39

Zodiariah_40

Zodiariah_41

Zodiariah_42
(immunity repressor)

Zodiariah_43
(helix-turn-helix DNA binding domain)

Zodiariah_44

Zodiariah_45

Zodiariah_46
(antirepressor)

Zodiariah_47

Zodiariah_48
(excise)

Zodiariah_49

Zodiariah_50

Zodiariah_51

Zodiariah_52

Zodiariah_53

Zodiariah_54

Zodiariah_55
(RecE-like exonuclease)

Zodiariah_56
(RecT-like DNA pairing protein)

Zodiariah_57

Zodiariah_58
(DNA methyltransferase)

Zodiariah_59

Zodiariah_60

Zodiariah_61

Zodiariah_62

Zodiariah_63

Zodiariah_64
(RepA-like replication initiator)

Zodiariah_65
(helicase loader)

Zodiariah_66
(RusA-like resolvase)

Zodiariah_67

Zodiariah_68
(HNH endonuclease)

Zodiariah_69

Zodiariah_70

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV876950
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 216
Pitt Freezer Box Grid# B2
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload