Mycobacterium phage Cuke
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Detailed Information for Phage Cuke
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByFrancesca Armstrong, Natalie Cabott
Year Found2016
Location FoundOrono, ME United States
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Naming NotesA vegetable garden, specifically with cucumbers
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 15, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3867
Genome length (bp)68869
Character of genome endsCircularly Permuted
GC Content49.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAC
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members

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Annotation StatusIn GenBank
Plaque NotesSiphoviridae
Long non-contractile tail, nonenveloped capsule head
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Cuke_1
(terminase, large subunit)

Cuke_2
(membrane protein)

Cuke_3
(portal protein)

Cuke_4

Cuke_5

Cuke_6

Cuke_7

Cuke_8

Cuke_9
(major capsid protein)

Cuke_10

Cuke_11

Cuke_12

Cuke_13

Cuke_14

Cuke_15

Cuke_16

Cuke_17
(major tail protein)

Cuke_18
(tail assembly chaperone)

Cuke_19
(tail assembly chaperone)

Cuke_20
(tape measure protein)

Cuke_21
(minor tail protein)

Cuke_22
(minor tail protein)

Cuke_23
(minor tail protein)

Cuke_24

Cuke_25

Cuke_26
(lysin A)

Cuke_27
(holin)

Cuke_28

Cuke_29
(membrane protein)

Cuke_30
(membrane protein)

Cuke_31
(lysin B)

Cuke_32

Cuke_33

Cuke_34

Cuke_35

Cuke_36

Cuke_37

Cuke_38

Cuke_39

Cuke_40

Cuke_41

Cuke_42

Cuke_43

Cuke_44

Cuke_45

Cuke_46

Cuke_47

Cuke_48

Cuke_49

Cuke_50

Cuke_51

Cuke_52
(membrane protein)

Cuke_53

Cuke_54

Cuke_55

Cuke_56

Cuke_57

Cuke_58

Cuke_59

Cuke_60

Cuke_61

Cuke_62

Cuke_63
(membrane protein)

Cuke_64

Cuke_65

Cuke_66
(integrase, (S-int))

Cuke_69

Cuke_70

Cuke_71

Cuke_72

Cuke_73
(dna helicase)

Cuke_74
(membrane protein)

Cuke_75

Cuke_76
(exonuclease)

Cuke_77
(AAA-ATPase)

Cuke_78

Cuke_79

Cuke_80

Cuke_81

Cuke_82
(MazG nucleotide pyrophosphohydrolase)

Cuke_83

Cuke_84

Cuke_85

Cuke_86
(dnaE DNA polymerase III (alpha))

Cuke_87
(dnaE DNA polymerase III (alpha))

Cuke_88

Cuke_89

Cuke_90
(membrane protein)

Cuke_91

Cuke_92

Cuke_93
(RuvC resolvase)

Cuke_94

Cuke_95

Cuke_96

Cuke_97

Cuke_98
(ssDNA binding protein)

Cuke_99

Cuke_100

Cuke_101

Cuke_102

Cuke_103

Cuke_104

Cuke_105

Cuke_106

Cuke_107
(DNA primase/polymerase)

Cuke_108

Cuke_109

Cuke_110

Cuke_111
(membrane protein)

Cuke_112

Cuke_113

Cuke_114

Cuke_115

Cuke_116

Cuke_117

Cuke_118

Cuke_119

Cuke_120

Cuke_121

Cuke_122

Cuke_123

Cuke_124

Cuke_125

Cuke_126

Cuke_127

Cuke_128

Cuke_129

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG757156
Refseq NumberNone yet
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload