Gordonia phage Fryberger
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Detailed Information for Phage Fryberger
Discovery Information
Isolation HostGordonia terrae 3612
Found ByRobert Fryberger
Year Found2016
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.445949 N, 79.953313 W Map
Discovery NotesFound in moist soil in the immediate vicinity of a storm drain following a light rain. Ambient temperature of 25 degrees Celsius. Plaques were found from an enriched sample.
Naming Notesmy last name
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 10, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage754
Genome length (bp)67234
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceACTCTGCCCAT
GC Content50.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDP
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionGettysburg College
Annotation StatusIn GenBank
Plaque NotesSmall clear plaque, under 1mm in diameter form when Phage Fryberger is plated.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Fryberger_1

Fryberger_2

Fryberger_3

Fryberger_4

Fryberger_5

Fryberger_6

Fryberger_7

Fryberger_8

Fryberger_9

Fryberger_10

Fryberger_11

Fryberger_12

Fryberger_13

Fryberger_14

Fryberger_15

Fryberger_16

Fryberger_17

Fryberger_18

Fryberger_19

Fryberger_20

Fryberger_21

Fryberger_22

Fryberger_23

Fryberger_24

Fryberger_25

Fryberger_26

Fryberger_27
(Lsr2-like DNA bridging protein)

Fryberger_28
(serine hydrolase)

Fryberger_29

Fryberger_30

Fryberger_31

Fryberger_32

Fryberger_33

Fryberger_34
(terminase)

Fryberger_35
(portal protein)

Fryberger_36
(MuF-like minor capsid protein)

Fryberger_37

Fryberger_38
(scaffolding protein)

Fryberger_39
(major capsid protein)

Fryberger_40
(head-to-tail adaptor)

Fryberger_41
(head-to-tail stopper)

Fryberger_42

Fryberger_43

Fryberger_44
(tail terminator)

Fryberger_45
(major tail protein)

Fryberger_46
(tail assembly chaperone)

Fryberger_47
(tail assembly chaperone)

Fryberger_48
(AAA-ATPase)

Fryberger_49

Fryberger_50

Fryberger_51
(tape measure protein)

Fryberger_52
(minor tail protein)

Fryberger_53
(minor tail protein)

Fryberger_54

Fryberger_55

Fryberger_56

Fryberger_57

Fryberger_58

Fryberger_59

Fryberger_60
(lysin A)

Fryberger_61

Fryberger_62

Fryberger_63

Fryberger_64
(Lsr2-like DNA bridging protein)

Fryberger_65

Fryberger_66

Fryberger_67

Fryberger_68

Fryberger_69

Fryberger_70

Fryberger_71

Fryberger_72

Fryberger_73

Fryberger_74

Fryberger_75

Fryberger_76

Fryberger_77

Fryberger_78

Fryberger_79

Fryberger_80

Fryberger_81

Fryberger_82
(Cas4 family exonuclease)

Fryberger_83

Fryberger_84

Fryberger_85

Fryberger_86

Fryberger_87

Fryberger_88

Fryberger_89

Fryberger_90

Fryberger_91
(WhiB family transcription factor)

Fryberger_92

Fryberger_93
(WhiB family transcription factor)

Fryberger_94

Fryberger_95
(HNH endonuclease)

Fryberger_96

Fryberger_97

Fryberger_98

Fryberger_99

Fryberger_100

Fryberger_101
(DNA primase/helicase)

Fryberger_102
(ssDNA-binding protein)

Fryberger_103

Fryberger_104

Fryberger_105

Fryberger_106

Fryberger_107
(endonuclease VII)

Fryberger_108

Fryberger_109

Fryberger_110

Fryberger_111
(ERF family ssDNA binding protein)

Fryberger_112

Fryberger_113

Fryberger_114

Fryberger_115
(helix-turn-helix DNA-binding protein)

Fryberger_116

Fryberger_117
(NrdH-like glutaredoxin)

Fryberger_118

Fryberger_119
(exonuclease)

Fryberger_120

Fryberger_121
(glycosyltransferase)

Fryberger_122

Fryberger_123

Fryberger_126

Fryberger_127

Fryberger_128

Fryberger_129

Fryberger_130

Fryberger_131

Fryberger_132

Fryberger_133

Fryberger_134

Fryberger_135

Fryberger_136

Fryberger_137
(glycosyltransferase)

Fryberger_138

Fryberger_139

Fryberger_140

Fryberger_141

Fryberger_142

Fryberger_143

Fryberger_144
(HNH endonuclease)

Fryberger_145

Fryberger_146

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH479913
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 42
Pitt Freezer Box Grid# E1
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload