Detailed Information for Phage Jazzy4900 |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Shannon Isenhart |
Year Found | 2021 |
Location Found | Lyons, CO USA |
Finding Institution | Colorado State University-Pueblo |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.268333 N, 105.422778 W Map |
Discovery Notes | Rocky soil under a burned but alive pine tree |
Naming Notes | Jazzy is the name of my first dog and the identification number for the volunteer fire department that fought the fire that burned the soil. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 7, 2023 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 4144 |
Genome length (bp) | 58504 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCGGCCCT |
GC Content | 48.4% |
Sequencing Notes | In the population that was sequenced of this phage, the sequencing reads showed that approximately 50% of genomes had a 92-base deletion, from position 15922 to 16013 inclusive. The non-deleted (longer) version has been reported as the final consensus sequence of this genome. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | FI |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
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Annotating Institution | Colorado State University-Pueblo |
Annotation Status | Overdue (Expected completion by 2/7/2024) |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |