Detailed Information for Phage Altostratus |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Former names | Cirrus |
Found By | Isabella Cloud |
Year Found | 2023 |
Location Found | Celina, TX United States |
Finding Institution | Baylor University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 32°C |
GPS Coordinates | 33.26872 N, 96.74106 W Map |
Discovery Notes | The phage was collected from the top layer of soil within my front yard. The soil texture was determined to be sandy loam, with a pH of 6.5. |
Naming Notes | The Cirrus phage name was a play on my last name because cirrus cloud formations are my favorite. The name was previously Cloud. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 16, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 2325 |
Genome length (bp) | 39715 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | CTCCCGCCTGCA |
GC Content | 63.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | FS |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
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Annotating Institution | Baylor University |
Annotation Status | QC Complete |
Plaque Notes | The average plaque size of the phage is 1.5 mm. The morphotype is Siphoviridae with an average tail length of 150.3 nm and an average head diameter of 48.78 nm. |
Morphotype | Siphoviridae |
Number of Genes | 70 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
185 |
Pitt Freezer Box Grid# |
A3 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |