Streptomyces phage Bimmel
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Detailed Information for Phage Bimmel
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByRyan Allen
Year Found2024
Location FoundSt. Louis, MO United States of America
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature25°C
GPS Coordinates38.64492 N, 90.31238 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2025
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage212
Genome length (bp)56554
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGCAGGGGGCG
GC Content61.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBT
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Plaque NotesPlaques are clearly lysed with semi-smooth margins. They are generally circular and vary from 0.9 mm to 1.8 mm in diameter when incubated for two days.
Number of Genes84
Number of tRNAs7
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Bimmel_1
(kinase)

Bimmel_2

Bimmel_3
(oxidoreductase)

Bimmel_4

Bimmel_5

Bimmel_6
(helix-turn-helix DNA binding domain)

Bimmel_7

Bimmel_8

Bimmel_9
(helix-turn-helix DNA binding domain)

Bimmel_10

Bimmel_11
(serine integrase)

Bimmel_12

Bimmel_13
(deoxycytidylate deaminase)

Bimmel_14

Bimmel_15

Bimmel_16

Bimmel_17

Bimmel_18
(DNA polymerase I)

Bimmel_19
(DNA methyltransferase)

Bimmel_20
(ThyX-like thymidylate synthase)

Bimmel_21

Bimmel_22
(ribonucleotide reductase)

Bimmel_23
(DNA binding protein)

Bimmel_24
(metallophosphatase)

Bimmel_25

Bimmel_26

Bimmel_27
(DNA primase)

Bimmel_28
(DNA primase)

Bimmel_29

Bimmel_30

Bimmel_31
(endonuclease VII)

Bimmel_32
(Holliday junction resolvase)

Bimmel_33
(DnaB-like dsDNA helicase)

Bimmel_34
(Cas4 exonuclease)

Bimmel_35

Bimmel_36
(helix-turn-helix DNA binding domain)

Bimmel_37
(HNH endonuclease)

Bimmel_38 — tRNA
(tRNA-Phe(gaa))

Bimmel_39 — tRNA
(tRNA-Glu(ttc))

Bimmel_40 — tRNA
(tRNA-Asn(gtt))

Bimmel_41 — tRNA
(tRNA-Met(cat))

Bimmel_42 — tRNA
(tRNA-Lys(ctt))

Bimmel_43 — tRNA
(tRNA-Trp(cca))

Bimmel_44 — tRNA
(tRNA-Pro(tgg))

Bimmel_45

Bimmel_46
(terminase, small subunit)

Bimmel_47

Bimmel_48
(terminase, large subunit)

Bimmel_49
(portal protein)

Bimmel_50
(scaffolding protein)

Bimmel_51
(major capsid protein)

Bimmel_52
(head-to-tail adaptor)

Bimmel_53
(head-to-tail stopper)

Bimmel_54

Bimmel_55
(tail terminator)

Bimmel_56
(major tail protein)

Bimmel_57
(tail assembly chaperone)

Bimmel_58
(tail assembly chaperone)

Bimmel_59
(tape measure protein)

Bimmel_60
(Dit)

Bimmel_61
(baseplate hub)

Bimmel_62
(minor tail protein)

Bimmel_63
(minor tail protein)

Bimmel_64

Bimmel_65
(endolysin)

Bimmel_66

Bimmel_67

Bimmel_68

Bimmel_69

Bimmel_70

Bimmel_71

Bimmel_72

Bimmel_73

Bimmel_74

Bimmel_75

Bimmel_76

Bimmel_77

Bimmel_78

Bimmel_79

Bimmel_80

Bimmel_81

Bimmel_82

Bimmel_83

Bimmel_84

Bimmel_85

Bimmel_86

Bimmel_87

Bimmel_88

Bimmel_89

Bimmel_90

Bimmel_91

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPX136954
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload